Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PDCL3P4-201ENST00000489621 720 ntBASIC7.17□□□□□ -1.26
SOX1O00570 EIF3LP3-201ENST00000495197 822 ntBASIC7.17□□□□□ -1.26
SOX1O00570 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.17□□□□□ -1.26
SOX1O00570 MTND2P33-201ENST00000506452 1031 ntBASIC7.17□□□□□ -1.26
SOX1O00570 RNA5SP206-201ENST00000516703 121 ntBASIC7.17□□□□□ -1.26
SOX1O00570 RNA5SP34-201ENST00000516887 130 ntBASIC7.17□□□□□ -1.26
SOX1O00570 AC112191.2-201ENST00000522428 333 ntBASIC7.17□□□□□ -1.26
SOX1O00570 TPRX1P1-201ENST00000557620 319 ntBASIC7.17□□□□□ -1.26
SOX1O00570 BGLT3-201ENST00000564523 994 ntBASIC7.17□□□□□ -1.26
SOX1O00570 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.17□□□□□ -1.26
SOX1O00570 AC012414.6-201ENST00000568241 401 ntBASIC7.17□□□□□ -1.26
SOX1O00570 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC7.17□□□□□ -1.26
SOX1O00570 BNIP3P26-201ENST00000600827 554 ntBASIC7.17□□□□□ -1.26
SOX1O00570 AL021368.3-201ENST00000607119 578 ntBASIC7.17□□□□□ -1.26
SOX1O00570 AC019131.2-201ENST00000609071 870 ntBASIC7.17□□□□□ -1.26
SOX1O00570 U4.5-201ENST00000617137 123 ntBASIC7.17□□□□□ -1.26
SOX1O00570 AP003789.1-201ENST00000617737 605 ntBASIC7.17□□□□□ -1.26
SOX1O00570 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX1O00570 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SOX1O00570 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SOX1O00570 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SOX1O00570 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SOX1O00570 AC109780.1-201ENST00000451768 1344 ntBASIC7.17□□□□□ -1.26
SOX1O00570 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.17□□□□□ -1.26
SOX1O00570 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX1O00570 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SOX1O00570 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX1O00570 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SOX1O00570 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SOX1O00570 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX1O00570 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.17□□□□□ -1.26
SOX1O00570 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.17□□□□□ -1.26
SOX1O00570 AC005539.1-201ENST00000443768 1479 ntBASIC7.17□□□□□ -1.26
SOX1O00570 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SOX1O00570 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
SOX1O00570 AP000766.1-201ENST00000561746 4140 ntBASIC7.16□□□□□ -1.26
SOX1O00570 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
SOX1O00570 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX1O00570 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SOX1O00570 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.16□□□□□ -1.26
SOX1O00570 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX1O00570 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SOX1O00570 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX1O00570 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
SOX1O00570 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX1O00570 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.16□□□□□ -1.26
SOX1O00570 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SOX1O00570 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SOX1O00570 Y_RNA.303-201ENST00000364998 94 ntBASIC7.16□□□□□ -1.26
SOX1O00570 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.16□□□□□ -1.26
SOX1O00570 BTF3P7-201ENST00000407097 488 ntBASIC7.16□□□□□ -1.26
SOX1O00570 RPS3AP2-201ENST00000407190 754 ntBASIC7.16□□□□□ -1.26
SOX1O00570 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.16□□□□□ -1.26
SOX1O00570 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 ISCA1P1-201ENST00000426679 387 ntBASIC7.16□□□□□ -1.26
SOX1O00570 AC104651.1-201ENST00000427559 735 ntBASIC7.16□□□□□ -1.26
SOX1O00570 CNOT7P1-201ENST00000429006 852 ntBASIC7.16□□□□□ -1.26
SOX1O00570 BX119917.1-201ENST00000432517 502 ntBASIC7.16□□□□□ -1.26
SOX1O00570 ATP5F1P1-201ENST00000433775 569 ntBASIC7.16□□□□□ -1.26
SOX1O00570 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX1O00570 AL592447.1-201ENST00000447592 540 ntBASIC7.16□□□□□ -1.26
SOX1O00570 AC011476.1-201ENST00000466725 307 ntBASIC7.16□□□□□ -1.26
SOX1O00570 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX1O00570 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 SNORA31.13-201ENST00000516624 135 ntBASIC7.16□□□□□ -1.26
SOX1O00570 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.16□□□□□ -1.26
SOX1O00570 AC008055.1-201ENST00000547032 609 ntBASIC7.16□□□□□ -1.26
SOX1O00570 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX1O00570 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX1O00570 AL121579.1-201ENST00000555129 305 ntBASIC7.16□□□□□ -1.26
SOX1O00570 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
SOX1O00570 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX1O00570 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX1O00570 AC083899.3-201ENST00000603413 594 ntBASIC7.16□□□□□ -1.26
SOX1O00570 SUMO2P15-201ENST00000604285 278 ntBASIC7.16□□□□□ -1.26
SOX1O00570 AC018714.1-201ENST00000605028 208 ntBASIC7.16□□□□□ -1.26
SOX1O00570 AL159169.2-201ENST00000610061 1269 ntBASIC7.16□□□□□ -1.26
SOX1O00570 AC025594.3-201ENST00000613068 790 ntBASIC7.16□□□□□ -1.26
SOX1O00570 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX1O00570 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.16□□□□□ -1.26
SOX1O00570 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.16□□□□□ -1.26
SOX1O00570 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.16□□□□□ -1.26
SOX1O00570 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SOX1O00570 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
SOX1O00570 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.16□□□□□ -1.26
SOX1O00570 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
SOX1O00570 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms