Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXN3O00409 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXN3O00409 SNX6P1-201ENST00000601728 1224 ntBASIC6.23□□□□□ -1.41
FOXN3O00409 AC068620.3-201ENST00000602749 560 ntBASIC6.23□□□□□ -1.41
FOXN3O00409 AC019131.2-201ENST00000609071 870 ntBASIC6.23□□□□□ -1.41
FOXN3O00409 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXN3O00409 AC016597.2-201ENST00000613256 341 ntBASIC6.23□□□□□ -1.41
FOXN3O00409 AP003476.1-201ENST00000623984 516 ntBASIC6.23□□□□□ -1.41
FOXN3O00409 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXN3O00409 AC000095.2-202ENST00000637415 154 ntBASIC6.23□□□□□ -1.41
FOXN3O00409 AC009452.1-201ENST00000640823 606 ntBASIC6.23□□□□□ -1.41
FOXN3O00409 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXN3O00409 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXN3O00409 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXN3O00409 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXN3O00409 MTCO1P4-201ENST00000520516 1409 ntBASIC6.23□□□□□ -1.41
FOXN3O00409 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXN3O00409 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXN3O00409 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXN3O00409 HSPD1P7-201ENST00000447985 1686 ntBASIC6.23□□□□□ -1.41
FOXN3O00409 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXN3O00409 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXN3O00409 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXN3O00409 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXN3O00409 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXN3O00409 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXN3O00409 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
FOXN3O00409 TMSB4XP2-201ENST00000335179 210 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
FOXN3O00409 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 RN7SKP279-201ENST00000411383 298 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 BX284632.2-201ENST00000421091 399 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AC093084.1-201ENST00000424233 687 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 DEFA9P-201ENST00000433042 285 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXN3O00409 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXN3O00409 AL512605.1-202ENST00000441919 381 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 AL359955.2-201ENST00000445380 353 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 AC093166.4-201ENST00000457867 318 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 AC099521.1-201ENST00000482557 334 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.22□□□□□ -1.41
FOXN3O00409 LSM3P4-201ENST00000502948 309 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AC122718.2-201ENST00000505325 591 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 RNA5SP473-201ENST00000516402 125 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AC011853.1-201ENST00000518911 454 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AP003355.1-201ENST00000518956 587 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXN3O00409 WBP1LP3-201ENST00000523033 208 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AC138701.1-201ENST00000524329 714 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 DUX4L52-201ENST00000549363 777 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXN3O00409 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXN3O00409 AC002310.3-201ENST00000569728 723 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXN3O00409 SNORD39.2-201ENST00000579995 76 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.22□□□□□ -1.41
FOXN3O00409 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
FOXN3O00409 AC068020.1-201ENST00000594215 661 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AC130352.1-201ENST00000602979 661 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 AC005034.4-201ENST00000603612 899 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
FOXN3O00409 AP005229.2-201ENST00000609980 697 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 AP001052.1-201ENST00000626421 99 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXN3O00409 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.22□□□□□ -1.41
FOXN3O00409 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXN3O00409 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXN3O00409 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXN3O00409 AC117409.1-201ENST00000470499 1310 ntBASIC6.22□□□□□ -1.41
FOXN3O00409 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXN3O00409 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXN3O00409 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.21□□□□□ -1.41
FOXN3O00409 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
FOXN3O00409 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
FOXN3O00409 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.21□□□□□ -1.41
FOXN3O00409 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms