Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC012377.1-202ENST00000558675 4811 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 SPATA31D5P-201ENST00000376459 4784 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 CD86-209ENST00000493101 1572 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AP000542.3-201ENST00000623391 6114 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PHF2P2-202ENST00000444553 2865 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC122688.4-201ENST00000623279 4394 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC135731.2-201ENST00000603029 2098 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 GNRHR2-202ENST00000361928 1035 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 Y_RNA.22-201ENST00000362492 102 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 SNORD3E-201ENST00000362899 217 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 Y_RNA.167-201ENST00000363735 109 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RABL2A-201ENST00000376439 623 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 Y_RNA.396-201ENST00000383949 103 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RNU6-1029P-201ENST00000384109 107 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RNU6-39P-201ENST00000384344 107 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 Y_RNA.493-201ENST00000384422 102 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RNU6-713P-201ENST00000384761 107 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 MIR558-201ENST00000384920 94 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RNU6-328P-201ENST00000390887 106 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 NDUFS5P1-201ENST00000405668 289 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC099535.1-201ENST00000408928 371 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL591848.1-201ENST00000413092 322 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 EIF3KP2-201ENST00000415266 626 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC008280.1-201ENST00000418851 412 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 TRPC6P-201ENST00000421233 880 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL139184.1-202ENST00000422303 222 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC073188.2-201ENST00000424036 701 ntTSL 5 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RPL36P2-201ENST00000426026 315 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 MED13P1-201ENST00000428342 171 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 TRMT112P4-201ENST00000429016 379 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 RPS26P40-201ENST00000435209 294 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC012075.1-201ENST00000436549 580 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 PA2G4P1-201ENST00000442248 1197 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 IGKV1D-35-201ENST00000442736 271 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL357079.1-202ENST00000445226 294 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 NANOGP10-201ENST00000453325 895 ntBASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 IGHV3-64-201ENST00000454421 431 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.3□□□□□ -1.72
KRTAP3-1Q9BYR8 AC004801.2-202ENST00000463559 283 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms