Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 GTF2IP11-201ENST00000526931 420 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 AC073869.8-201ENST00000641806 335 ntBASIC6.92□□□□□ -1.3
ABCA3Q99758 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
ABCA3Q99758 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ABCA3Q99758 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.91□□□□□ -1.3
ABCA3Q99758 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.91□□□□□ -1.3
ABCA3Q99758 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.91□□□□□ -1.3
ABCA3Q99758 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ABCA3Q99758 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ABCA3Q99758 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.91□□□□□ -1.3
ABCA3Q99758 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.91□□□□□ -1.3
ABCA3Q99758 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
ABCA3Q99758 RPS3AP23-201ENST00000401762 784 ntBASIC6.91□□□□□ -1.3
ABCA3Q99758 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.91□□□□□ -1.3
ABCA3Q99758 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ABCA3Q99758 AC009480.2-201ENST00000422916 432 ntBASIC6.91□□□□□ -1.3
ABCA3Q99758 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.91□□□□□ -1.3
ABCA3Q99758 MIR4284-201ENST00000578924 81 ntBASIC6.91□□□□□ -1.3
ABCA3Q99758 AL592148.3-201ENST00000608771 2646 ntBASIC6.91□□□□□ -1.3
ABCA3Q99758 AL121873.1-201ENST00000616013 524 ntBASIC6.91□□□□□ -1.3
ABCA3Q99758 SAMMSON-226ENST00000642089 1582 ntBASIC6.91□□□□□ -1.3
ABCA3Q99758 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC6.91□□□□□ -1.3
ABCA3Q99758 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
ABCA3Q99758 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ABCA3Q99758 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ABCA3Q99758 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ABCA3Q99758 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.91□□□□□ -1.3
ABCA3Q99758 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
ABCA3Q99758 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.9□□□□□ -1.3
ABCA3Q99758 PPIAP9-201ENST00000403866 498 ntBASIC6.9□□□□□ -1.3
ABCA3Q99758 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.9□□□□□ -1.3
ABCA3Q99758 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.9□□□□□ -1.3
ABCA3Q99758 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.9□□□□□ -1.3
ABCA3Q99758 NOP56P2-201ENST00000447491 769 ntBASIC6.9□□□□□ -1.3
ABCA3Q99758 AC083829.1-201ENST00000503756 657 ntBASIC6.9□□□□□ -1.3
ABCA3Q99758 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.9□□□□□ -1.3
ABCA3Q99758 OR5M2P-201ENST00000529003 936 ntBASIC6.9□□□□□ -1.3
ABCA3Q99758 TOMM20P2-201ENST00000540082 421 ntBASIC6.9□□□□□ -1.3
ABCA3Q99758 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.9□□□□□ -1.3
ABCA3Q99758 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
ABCA3Q99758 AC010857.1-201ENST00000606398 594 ntBASIC6.9□□□□□ -1.3
ABCA3Q99758 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
ABCA3Q99758 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.9□□□□□ -1.3
ABCA3Q99758 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
ABCA3Q99758 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.9□□□□□ -1.3
ABCA3Q99758 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.9□□□□□ -1.3
ABCA3Q99758 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.9□□□□□ -1.31
ABCA3Q99758 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ABCA3Q99758 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
ABCA3Q99758 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.9□□□□□ -1.31
ABCA3Q99758 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.9□□□□□ -1.31
ABCA3Q99758 TXNP2-201ENST00000443918 295 ntBASIC6.9□□□□□ -1.31
ABCA3Q99758 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
ABCA3Q99758 NIP7P2-201ENST00000485801 544 ntBASIC6.9□□□□□ -1.31
ABCA3Q99758 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.9□□□□□ -1.31
ABCA3Q99758 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.9□□□□□ -1.31
ABCA3Q99758 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.9□□□□□ -1.31
ABCA3Q99758 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.9□□□□□ -1.31
ABCA3Q99758 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
ABCA3Q99758 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.9□□□□□ -1.31
ABCA3Q99758 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ABCA3Q99758 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.89□□□□□ -1.31
ABCA3Q99758 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ABCA3Q99758 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ABCA3Q99758 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ABCA3Q99758 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
ABCA3Q99758 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
ABCA3Q99758 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
ABCA3Q99758 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
ABCA3Q99758 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.89□□□□□ -1.31
ABCA3Q99758 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
ABCA3Q99758 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.89□□□□□ -1.31
ABCA3Q99758 RPS29P10-201ENST00000439197 166 ntBASIC6.89□□□□□ -1.31
ABCA3Q99758 AC010733.1-201ENST00000451515 401 ntBASIC6.89□□□□□ -1.31
ABCA3Q99758 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.89□□□□□ -1.31
ABCA3Q99758 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.89□□□□□ -1.31
ABCA3Q99758 AC011005.3-201ENST00000491624 395 ntBASIC6.89□□□□□ -1.31
ABCA3Q99758 AC023818.1-201ENST00000498379 384 ntBASIC6.89□□□□□ -1.31
ABCA3Q99758 AC111000.3-201ENST00000508057 576 ntBASIC6.89□□□□□ -1.31
ABCA3Q99758 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.89□□□□□ -1.31
ABCA3Q99758 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ABCA3Q99758 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ABCA3Q99758 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.89□□□□□ -1.31
ABCA3Q99758 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.89□□□□□ -1.31
ABCA3Q99758 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
ABCA3Q99758 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ABCA3Q99758 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
ABCA3Q99758 AC144833.1-201ENST00000567953 4089 ntBASIC6.88□□□□□ -1.31
ABCA3Q99758 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC6.88□□□□□ -1.31
ABCA3Q99758 KARSP3-201ENST00000571212 1504 ntBASIC6.88□□□□□ -1.31
ABCA3Q99758 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
ABCA3Q99758 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ABCA3Q99758 AC092651.1-201ENST00000426110 312 ntBASIC6.88□□□□□ -1.31
ABCA3Q99758 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.88□□□□□ -1.31
ABCA3Q99758 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.88□□□□□ -1.31
ABCA3Q99758 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.88□□□□□ -1.31
ABCA3Q99758 AP001880.2-201ENST00000538233 448 ntBASIC6.88□□□□□ -1.31
ABCA3Q99758 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms