Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC027088.4-201ENST00000611559 1947 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 HSPD1P9-201ENST00000420325 1636 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 PDZK1P1-202ENST00000425209 1350 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 BMS1P3-201ENST00000372011 932 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 RNA5SP241-201ENST00000391326 114 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC234781.4-201ENST00000419384 244 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 CYCSP24-201ENST00000445119 316 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AL589765.3-201ENST00000446084 462 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AL358876.1-201ENST00000453364 1075 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC011225.1-201ENST00000457751 369 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC098847.1-201ENST00000473094 348 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 RPL7AP10-201ENST00000481016 791 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC018639.1-201ENST00000492994 442 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 RNA5SP441-201ENST00000516809 88 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC079064.1-201ENST00000528365 362 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 RPA2P1-201ENST00000556557 721 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC090236.2-201ENST00000587933 1101 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 AC068768.2-201ENST00000602352 343 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 MIR6885-201ENST00000612241 66 ntBASIC4.07□□□□□ -1.76
AP1S3Q96PC3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
AP1S3Q96PC3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 UBBP2-201ENST00000376781 231 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 MIR137-201ENST00000385223 102 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 SNORA48.4-201ENST00000391089 134 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 SNORA79B-201ENST00000410557 148 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 RN7SKP38-201ENST00000410782 309 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 RN7SKP29-201ENST00000410957 272 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 RPS6P23-201ENST00000413224 722 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AK4P4-201ENST00000419465 646 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AL358176.3-201ENST00000420757 454 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 GTF2IP2-201ENST00000424290 697 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 HSPD1P12-201ENST00000429127 1069 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 KCTD9P1-201ENST00000430462 1167 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC126120.1-201ENST00000431082 470 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC090018.1-201ENST00000434369 367 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AL031584.1-201ENST00000447169 754 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC097463.1-201ENST00000447288 481 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 HMGB1P7-201ENST00000450921 612 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 CFL1P4-201ENST00000451536 498 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC004890.1-201ENST00000461005 181 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC021660.1-201ENST00000465006 554 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 RPL5P16-201ENST00000471467 790 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 RN7SL362P-201ENST00000494228 267 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 RPS27AP18-201ENST00000515536 459 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC024940.3-201ENST00000538551 316 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 HMGN1P26-201ENST00000558737 303 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC018552.1-201ENST00000562099 811 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC004232.2-201ENST00000574245 821 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AP005119.1-201ENST00000580956 292 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 AC090774.2-201ENST00000584708 322 ntBASIC4.06□□□□□ -1.76
AP1S3Q96PC3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms