Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC093849.1-201ENST00000563631 2209 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 OR1L6-202ENST00000373684 1044 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 TRAV35-201ENST00000390462 330 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 OR6E1P-201ENST00000414424 923 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 Z93019.1-201ENST00000416450 973 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 HYALP1-201ENST00000417674 1279 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 IPPKP1-201ENST00000422501 768 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 HSPD1P12-201ENST00000429127 1069 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 AC002504.1-201ENST00000438281 691 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 AC084754.1-201ENST00000463466 464 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 RPS12P31-201ENST00000491419 398 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 PSMA2P2-201ENST00000504319 686 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 IMPA1P1-201ENST00000510718 842 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 AC098976.1-201ENST00000513014 541 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 SNORD46.2-201ENST00000516021 102 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 AC026367.3-201ENST00000619032 590 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.55□□□□□ -1.52
CDKL3Q8IVW4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AL031595.2-201ENST00000624215 19071 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 RNA5SP187-201ENST00000384400 119 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 GSTM5P1-201ENST00000434751 660 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AC007998.1-201ENST00000474156 672 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AC022133.1-201ENST00000490961 571 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 HMGB1P44-201ENST00000508597 572 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AC022360.1-201ENST00000521058 340 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AC092709.1-201ENST00000521355 1045 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AC130364.2-201ENST00000528639 604 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AL359742.1-201ENST00000622497 540 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AC132068.1-201ENST00000623805 459 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AP003400.3-201ENST00000624904 346 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 DDX18P6-201ENST00000450119 1997 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 AC112198.2-201ENST00000426589 6996 ntBASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.54□□□□□ -1.52
CDKL3Q8IVW4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.53□□□□□ -1.52
CDKL3Q8IVW4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDKL3Q8IVW4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDKL3Q8IVW4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDKL3Q8IVW4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDKL3Q8IVW4 OR9G4-201ENST00000302957 984 ntBASIC5.53□□□□□ -1.52
CDKL3Q8IVW4 RNA5SP510-201ENST00000364697 99 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms