Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIR421-201ENST00000365696 85 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 MIR550A3-201ENST00000390735 95 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 RN7SKP166-201ENST00000410812 305 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 AL133173.1-201ENST00000423458 397 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 CYCSP12-201ENST00000437729 300 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 RPS12P17-201ENST00000438591 377 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 MTND2P25-201ENST00000449028 610 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 RPL7L1P3-201ENST00000455249 689 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 AC087672.1-201ENST00000479876 766 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 RPS3AP15-201ENST00000483874 781 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 TPM3P3-201ENST00000521343 354 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 AL049779.2-201ENST00000553847 315 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 MTND4LP25-201ENST00000570218 163 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 RN7SL708P-201ENST00000580952 299 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 AC015722.2-201ENST00000622210 551 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 GTF2IP4-201ENST00000453092 2054 ntBASIC6.27□□□□□ -1.41
HERC6Q8IVU3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HERC6Q8IVU3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC003985.2-201ENST00000562268 1669 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AL159987.1-201ENST00000347911 293 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 RNA5SP183-201ENST00000362452 119 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 Y_RNA.110-201ENST00000363220 99 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 RN7SKP213-201ENST00000410746 298 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AL357752.1-201ENST00000412817 349 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AL590762.4-201ENST00000425885 253 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC023141.8-201ENST00000442554 208 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 CCRL1P1-201ENST00000449542 1053 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC112187.1-201ENST00000455837 479 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AL022319.1-201ENST00000458183 1167 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AL157777.1-201ENST00000468100 304 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 RPSAP50-201ENST00000481955 852 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 RPL23AP40-201ENST00000487630 390 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC072052.1-201ENST00000496556 306 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 CCDC11P1-201ENST00000503137 1162 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC092868.3-201ENST00000560515 784 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 TMF1P1-201ENST00000576058 373 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AP002884.5-201ENST00000595053 1132 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC063977.5-201ENST00000601044 974 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC005899.7-201ENST00000618199 588 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 U1.34-201ENST00000618578 162 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AP003499.2-201ENST00000624100 483 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 AC106730.3-201ENST00000624568 641 ntBASIC6.26□□□□□ -1.41
HERC6Q8IVU3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HERC6Q8IVU3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms