Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CBX1P83916 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.53□□□□□ -1.52
CBX1P83916 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CBX1P83916 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.53□□□□□ -1.52
CBX1P83916 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CBX1P83916 GAPDHP24-201ENST00000328713 983 ntBASIC5.53□□□□□ -1.52
CBX1P83916 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CBX1P83916 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CBX1P83916 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CBX1P83916 RN7SKP104-201ENST00000362605 328 ntBASIC5.53□□□□□ -1.52
CBX1P83916 RNU1-19P-201ENST00000363306 165 ntBASIC5.53□□□□□ -1.52
CBX1P83916 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.53□□□□□ -1.52
CBX1P83916 MIR138-2-201ENST00000384916 84 ntBASIC5.53□□□□□ -1.52
CBX1P83916 AL445213.1-201ENST00000412589 747 ntBASIC5.53□□□□□ -1.52
CBX1P83916 NIFKP3-201ENST00000417799 865 ntBASIC5.53□□□□□ -1.52
CBX1P83916 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.53□□□□□ -1.52
CBX1P83916 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.53□□□□□ -1.52
CBX1P83916 GTF2IP2-201ENST00000424290 697 ntBASIC5.53□□□□□ -1.52
CBX1P83916 AC130360.1-201ENST00000425489 1117 ntBASIC5.53□□□□□ -1.52
CBX1P83916 AC007679.3-201ENST00000434035 414 ntBASIC5.53□□□□□ -1.52
CBX1P83916 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.53□□□□□ -1.52
CBX1P83916 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.53□□□□□ -1.52
CBX1P83916 AL356981.1-201ENST00000454879 684 ntBASIC5.53□□□□□ -1.52
CBX1P83916 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.53□□□□□ -1.52
CBX1P83916 RN7SL267P-201ENST00000485107 261 ntBASIC5.53□□□□□ -1.52
CBX1P83916 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.53□□□□□ -1.52
CBX1P83916 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.53□□□□□ -1.52
CBX1P83916 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CBX1P83916 Vault.2-201ENST00000516519 98 ntBASIC5.53□□□□□ -1.52
CBX1P83916 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.53□□□□□ -1.52
CBX1P83916 AP002004.1-206ENST00000532441 876 ntBASIC5.53□□□□□ -1.52
CBX1P83916 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.53□□□□□ -1.52
CBX1P83916 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.53□□□□□ -1.52
CBX1P83916 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.53□□□□□ -1.52
CBX1P83916 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.53□□□□□ -1.52
CBX1P83916 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CBX1P83916 AC096996.1-201ENST00000563813 325 ntBASIC5.53□□□□□ -1.52
CBX1P83916 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.53□□□□□ -1.52
CBX1P83916 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.53□□□□□ -1.52
CBX1P83916 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.53□□□□□ -1.52
CBX1P83916 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.53□□□□□ -1.52
CBX1P83916 AC006453.3-201ENST00000635891 377 ntBASIC5.53□□□□□ -1.52
CBX1P83916 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
CBX1P83916 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CBX1P83916 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CBX1P83916 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.53□□□□□ -1.52
CBX1P83916 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CBX1P83916 SCN1A-220ENST00000641603 12506 ntBASIC5.53□□□□□ -1.52
CBX1P83916 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.53□□□□□ -1.52
CBX1P83916 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CBX1P83916 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CBX1P83916 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CBX1P83916 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CBX1P83916 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.52□□□□□ -1.53
CBX1P83916 GNL2P1-201ENST00000451274 2190 ntBASIC5.52□□□□□ -1.53
CBX1P83916 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CBX1P83916 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CBX1P83916 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CBX1P83916 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CBX1P83916 AC003045.1-201ENST00000398779 713 ntBASIC5.52□□□□□ -1.53
CBX1P83916 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.52□□□□□ -1.53
CBX1P83916 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.52□□□□□ -1.53
CBX1P83916 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.52□□□□□ -1.53
CBX1P83916 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CBX1P83916 DEFA9P-201ENST00000433042 285 ntBASIC5.52□□□□□ -1.53
CBX1P83916 AL645939.3-201ENST00000435408 225 ntBASIC5.52□□□□□ -1.53
CBX1P83916 NPM1P23-201ENST00000440193 849 ntBASIC5.52□□□□□ -1.53
CBX1P83916 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.52□□□□□ -1.53
CBX1P83916 COX4I1P2-201ENST00000447446 547 ntBASIC5.52□□□□□ -1.53
CBX1P83916 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.52□□□□□ -1.53
CBX1P83916 AC005008.1-201ENST00000456151 612 ntBASIC5.52□□□□□ -1.53
CBX1P83916 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.52□□□□□ -1.53
CBX1P83916 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.52□□□□□ -1.53
CBX1P83916 RPEP1-201ENST00000504507 658 ntBASIC5.52□□□□□ -1.53
CBX1P83916 AC139365.2-201ENST00000517972 253 ntBASIC5.52□□□□□ -1.53
CBX1P83916 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.52□□□□□ -1.53
CBX1P83916 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.52□□□□□ -1.53
CBX1P83916 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.52□□□□□ -1.53
CBX1P83916 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CBX1P83916 MTND2P17-201ENST00000550281 688 ntBASIC5.52□□□□□ -1.53
CBX1P83916 CHEK2P2-201ENST00000554701 672 ntBASIC5.52□□□□□ -1.53
CBX1P83916 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.52□□□□□ -1.53
CBX1P83916 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CBX1P83916 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.52□□□□□ -1.53
CBX1P83916 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CBX1P83916 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.52□□□□□ -1.53
CBX1P83916 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.52□□□□□ -1.53
CBX1P83916 AL512430.4-201ENST00000603085 613 ntBASIC5.52□□□□□ -1.53
CBX1P83916 AL354950.1-201ENST00000614150 568 ntBASIC5.52□□□□□ -1.53
CBX1P83916 AL356752.1-201ENST00000615844 593 ntBASIC5.52□□□□□ -1.53
CBX1P83916 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CBX1P83916 AC092435.4-201ENST00000623012 4159 ntBASIC5.52□□□□□ -1.53
CBX1P83916 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CBX1P83916 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CBX1P83916 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
CBX1P83916 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CBX1P83916 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.51□□□□□ -1.53
CBX1P83916 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CBX1P83916 AL133243.3-201ENST00000617415 3004 ntBASIC5.51□□□□□ -1.53
CBX1P83916 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms