Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.97□□□□□ -1.29
MRE11P49959 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.97□□□□□ -1.29
MRE11P49959 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
MRE11P49959 RPL12P31-201ENST00000478433 450 ntBASIC6.97□□□□□ -1.29
MRE11P49959 RN7SL273P-201ENST00000481561 299 ntBASIC6.97□□□□□ -1.29
MRE11P49959 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.97□□□□□ -1.29
MRE11P49959 AC010343.2-201ENST00000510162 224 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC006499.4-201ENST00000510947 694 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC108103.1-201ENST00000511286 446 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC093664.1-201ENST00000511779 289 ntBASIC6.97□□□□□ -1.29
MRE11P49959 SNORD46.2-201ENST00000516021 102 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.97□□□□□ -1.29
MRE11P49959 AC027369.2-201ENST00000528030 440 ntBASIC6.97□□□□□ -1.29
MRE11P49959 DUXAP5-201ENST00000529668 529 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.97□□□□□ -1.29
MRE11P49959 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.97□□□□□ -1.29
MRE11P49959 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.97□□□□□ -1.29
MRE11P49959 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
MRE11P49959 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.97□□□□□ -1.29
MRE11P49959 AC126615.2-201ENST00000553003 515 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.97□□□□□ -1.29
MRE11P49959 TXNP4-201ENST00000575018 310 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC245052.7-201ENST00000601161 359 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC091133.5-201ENST00000603088 301 ntBASIC6.97□□□□□ -1.29
MRE11P49959 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.97□□□□□ -1.29
MRE11P49959 AL450270.1-201ENST00000606160 391 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.97□□□□□ -1.29
MRE11P49959 AC007786.3-201ENST00000615154 596 ntBASIC6.97□□□□□ -1.29
MRE11P49959 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC022079.1-201ENST00000621546 602 ntBASIC6.97□□□□□ -1.29
MRE11P49959 AC097460.3-201ENST00000623099 442 ntBASIC6.97□□□□□ -1.29
MRE11P49959 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.97□□□□□ -1.29
MRE11P49959 AC119674.1-220ENST00000641502 1048 ntBASIC6.97□□□□□ -1.29
MRE11P49959 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.97□□□□□ -1.29
MRE11P49959 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
MRE11P49959 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
MRE11P49959 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.97□□□□□ -1.29
MRE11P49959 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.97□□□□□ -1.29
MRE11P49959 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
MRE11P49959 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
MRE11P49959 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.97□□□□□ -1.29
MRE11P49959 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
MRE11P49959 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
MRE11P49959 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
MRE11P49959 AC010266.2-201ENST00000564741 3255 ntBASIC6.96□□□□□ -1.29
MRE11P49959 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.96□□□□□ -1.29
MRE11P49959 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.96□□□□□ -1.29
MRE11P49959 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
MRE11P49959 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
MRE11P49959 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
MRE11P49959 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
MRE11P49959 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
MRE11P49959 OR7A2P-201ENST00000304105 930 ntBASIC6.96□□□□□ -1.3
MRE11P49959 RN7SKP145-201ENST00000363291 303 ntBASIC6.96□□□□□ -1.3
MRE11P49959 MIR585-201ENST00000384887 94 ntBASIC6.96□□□□□ -1.3
MRE11P49959 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
MRE11P49959 PTCD2P2-201ENST00000415579 1095 ntBASIC6.96□□□□□ -1.3
MRE11P49959 AJ239321.1-201ENST00000424255 564 ntBASIC6.96□□□□□ -1.3
MRE11P49959 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
MRE11P49959 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.96□□□□□ -1.3
MRE11P49959 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.96□□□□□ -1.3
MRE11P49959 NANOGP9-201ENST00000439890 892 ntBASIC6.96□□□□□ -1.3
MRE11P49959 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.96□□□□□ -1.3
MRE11P49959 CUBNP2-201ENST00000443534 1139 ntBASIC6.96□□□□□ -1.3
MRE11P49959 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.96□□□□□ -1.3
MRE11P49959 MTND1P33-201ENST00000446251 917 ntBASIC6.96□□□□□ -1.3
MRE11P49959 AC069277.2-201ENST00000454211 432 ntBASIC6.96□□□□□ -1.3
MRE11P49959 RN7SL39P-201ENST00000462264 297 ntBASIC6.96□□□□□ -1.3
MRE11P49959 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.96□□□□□ -1.3
MRE11P49959 PSMA2P2-201ENST00000504319 686 ntBASIC6.96□□□□□ -1.3
MRE11P49959 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.96□□□□□ -1.3
MRE11P49959 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.96□□□□□ -1.3
MRE11P49959 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.96□□□□□ -1.3
MRE11P49959 MORF4L1P3-201ENST00000525966 950 ntBASIC6.96□□□□□ -1.3
MRE11P49959 AC023538.1-201ENST00000534576 736 ntBASIC6.96□□□□□ -1.3
MRE11P49959 CKS1BP1-201ENST00000555221 240 ntBASIC6.96□□□□□ -1.3
MRE11P49959 AL589863.1-201ENST00000595383 631 ntBASIC6.96□□□□□ -1.3
MRE11P49959 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
MRE11P49959 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.96□□□□□ -1.3
MRE11P49959 AL357140.4-201ENST00000636827 412 ntBASIC6.96□□□□□ -1.3
MRE11P49959 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.96□□□□□ -1.3
MRE11P49959 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.96□□□□□ -1.3
MRE11P49959 FBXL21-201ENST00000297158 1305 ntBASIC6.96□□□□□ -1.3
MRE11P49959 PSMC1P4-201ENST00000515236 1327 ntBASIC6.96□□□□□ -1.3
MRE11P49959 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.96□□□□□ -1.3
MRE11P49959 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
MRE11P49959 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
MRE11P49959 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.95□□□□□ -1.3
MRE11P49959 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
MRE11P49959 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 AC016583.1-201ENST00000624221 2431 ntBASIC6.95□□□□□ -1.3
MRE11P49959 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
MRE11P49959 MIR23A-201ENST00000385245 73 ntBASIC6.95□□□□□ -1.3
MRE11P49959 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms