Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 RNA5SP378-201ENST00000363646 120 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 SNORA62.2-201ENST00000364672 152 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 Y_RNA.356-201ENST00000365475 113 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AL139327.1-201ENST00000382988 348 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 RPL5P5-201ENST00000392009 893 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AL589647.1-201ENST00000402485 466 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 U3.31-201ENST00000408113 216 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 GAS8-AS1-201ENST00000408886 435 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 SDCBPP3-201ENST00000419629 891 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AF228730.4-201ENST00000421457 183 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 RPL5P34-201ENST00000426545 891 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 BMS1P10-201ENST00000443754 1120 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 MTND4P19-201ENST00000446659 478 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC002486.2-201ENST00000447806 590 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 RPL26P28-201ENST00000451325 435 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 RPL10P6-201ENST00000457497 318 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL861P-201ENST00000473793 285 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC026254.1-201ENST00000479473 431 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AP005202.1-201ENST00000489915 867 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC108064.1-201ENST00000513791 460 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 RNU6-885P-201ENST00000516607 104 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 HMGB1P23-201ENST00000518743 568 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AK6P1-201ENST00000540219 478 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC023310.2-201ENST00000553844 547 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL14P-201ENST00000579715 298 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 RN7SL237P-201ENST00000580912 287 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 PRR13P5-201ENST00000596581 442 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AL109918.2-201ENST00000605188 279 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AL590560.2-201ENST00000608430 732 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 MLECP1-201ENST00000615893 709 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC005790.1-201ENST00000619774 450 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC068880.5-201ENST00000624331 290 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC110716.2-201ENST00000563865 3945 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 AC011008.2-201ENST00000624866 3352 ntBASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDHGA11Q9Y5H2 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 RNU6-582P-201ENST00000362989 107 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 CST13P-201ENST00000376992 428 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 FTH1P26-201ENST00000406512 701 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 BTF3L4P3-201ENST00000418879 476 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AL953862.1-201ENST00000423016 168 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 AC008850.1-201ENST00000427546 362 ntBASIC7.31□□□□□ -1.24
PCDHGA11Q9Y5H2 KRT18P53-201ENST00000431919 117 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms