Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AL078621.3-201ENST00000623707 2042 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC104964.3-201ENST00000606115 2860 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 RNU1-146P-201ENST00000364015 165 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 NDUFB4P8-201ENST00000435351 367 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 RPL7AP6-201ENST00000477943 801 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 RN7SL808P-201ENST00000496066 299 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC111000.6-201ENST00000514471 709 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 RN7SL708P-201ENST00000580952 299 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AL139124.1-201ENST00000609123 421 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC010632.3-201ENST00000611377 369 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AC073869.8-201ENST00000641806 335 ntBASIC6.5□□□□□ -1.37
SALL1Q9NSC2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AC092451.3-201ENST00000625067 1343 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 CCAT2-201ENST00000630920 1752 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AL359715.3-201ENST00000569267 2123 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AC144833.1-201ENST00000567953 4089 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 NIPA2P1-201ENST00000426223 976 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AC009963.4-201ENST00000448535 339 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AC092754.1-201ENST00000472975 479 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 RPS4XP20-201ENST00000505751 772 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AC091912.1-201ENST00000511351 248 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AC024940.3-201ENST00000538551 316 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.49□□□□□ -1.37
SALL1Q9NSC2 MIR3691-201ENST00000578066 90 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 AC006116.3-201ENST00000592968 361 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 RNA5SP439-201ENST00000617595 124 ntBASIC6.49□□□□□ -1.37
SALL1Q9NSC2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 RNA5SP305-201ENST00000362665 119 ntBASIC6.48□□□□□ -1.37
SALL1Q9NSC2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 AC006455.6-201ENST00000426192 893 ntBASIC6.48□□□□□ -1.37
SALL1Q9NSC2 AC009784.1-201ENST00000426484 460 ntBASIC6.48□□□□□ -1.37
SALL1Q9NSC2 HSPE1P27-201ENST00000430808 296 ntBASIC6.48□□□□□ -1.37
SALL1Q9NSC2 MRPS21P3-201ENST00000436696 262 ntBASIC6.48□□□□□ -1.37
SALL1Q9NSC2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SALL1Q9NSC2 AP001157.1-201ENST00000550837 2339 ntBASIC6.47□□□□□ -1.37
SALL1Q9NSC2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 SAMM50P1-201ENST00000455403 1399 ntBASIC6.47□□□□□ -1.37
SALL1Q9NSC2 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.47□□□□□ -1.37
SALL1Q9NSC2 SNORD56.6-201ENST00000384569 71 ntBASIC6.47□□□□□ -1.37
SALL1Q9NSC2 U3.28-201ENST00000391249 210 ntBASIC6.47□□□□□ -1.37
SALL1Q9NSC2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms