Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
TRAIPQ9BWF2 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 RN7SKP191-201ENST00000364713 306 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 RNU6-621P-201ENST00000364752 109 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC092634.1-201ENST00000366505 199 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC026310.1-201ENST00000396004 378 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 RPS3AP26-201ENST00000398259 784 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 NCLP2-201ENST00000416078 1462 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 SPATA20P1-201ENST00000423089 438 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC019178.2-201ENST00000423595 505 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AL590103.1-201ENST00000434488 307 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 E2F6P3-201ENST00000441743 743 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC073648.4-201ENST00000442655 781 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 PPP1R2P6-201ENST00000478565 588 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC012123.2-201ENST00000485809 248 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 OR2A20P-203ENST00000498397 1268 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC104685.1-201ENST00000502445 371 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC093281.2-201ENST00000510153 597 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 SCARNA6.1-201ENST00000516989 238 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AKIRIN1P1-201ENST00000547384 544 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 SERPINE4P-201ENST00000554978 281 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC012435.1-202ENST00000568772 240 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC090771.1-201ENST00000585803 1618 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 ZNF658B-201ENST00000602828 3408 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AP005329.3-201ENST00000609924 686 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 MIR6849-201ENST00000618543 69 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 Z69908.1-201ENST00000622603 247 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC073348.1-201ENST00000623002 331 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC011447.7-201ENST00000624228 1590 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 AC011471.4-201ENST00000638271 216 ntBASIC7.65□□□□□ -1.18
TRAIPQ9BWF2 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.65□□□□□ -1.19
TRAIPQ9BWF2 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
TRAIPQ9BWF2 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
TRAIPQ9BWF2 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
TRAIPQ9BWF2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
TRAIPQ9BWF2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
TRAIPQ9BWF2 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.65□□□□□ -1.19
TRAIPQ9BWF2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRAIPQ9BWF2 UG0898H09-202ENST00000623646 7040 ntBASIC7.64□□□□□ -1.19
TRAIPQ9BWF2 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.64□□□□□ -1.19
TRAIPQ9BWF2 CASC19-204ENST00000641001 2055 ntBASIC7.64□□□□□ -1.19
TRAIPQ9BWF2 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TRAIPQ9BWF2 AC096921.2-201ENST00000561507 1916 ntBASIC7.64□□□□□ -1.19
TRAIPQ9BWF2 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRAIPQ9BWF2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
TRAIPQ9BWF2 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRAIPQ9BWF2 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.64□□□□□ -1.19
TRAIPQ9BWF2 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms