Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 MTND1P9-201ENST00000453775 944 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 U8.20-201ENST00000459445 131 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 RPL7P15-201ENST00000461190 712 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC006534.1-201ENST00000469329 541 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 PA2G4P4-201ENST00000473864 1182 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 HSPD1P18-201ENST00000504252 244 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 RNU6-201P-201ENST00000517100 61 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 PCNAP4-201ENST00000532690 730 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 MIR4450-201ENST00000583589 65 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AP000654.2-201ENST00000605633 586 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 LYG2-206ENST00000626374 650 ntTSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 SOCS5P5-201ENST00000402732 1586 ntBASIC7.46□□□□□ -1.22
USB1Q9BQ65 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
USB1Q9BQ65 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
USB1Q9BQ65 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 RPE-216ENST00000454822 2130 ntTSL 2 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 FBXW11P1-201ENST00000393804 1474 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 Y_RNA.149-201ENST00000363558 117 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC117470.1-201ENST00000381974 330 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 MTCYBP4-201ENST00000401524 249 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 NPM1P38-201ENST00000403835 865 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 BTBD10P2-201ENST00000404779 676 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 RPS6P23-201ENST00000413224 722 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 PUDPP1-201ENST00000421058 495 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 MTCYBP10-201ENST00000424905 650 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC104837.2-201ENST00000427236 424 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 PIGCP2-201ENST00000433617 835 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 AL513318.1-201ENST00000437925 991 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 RPS10P3-201ENST00000439253 494 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 RPL15P1-201ENST00000439981 600 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 RPS7P5-201ENST00000441482 581 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 RPL32P28-201ENST00000443577 397 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
USB1Q9BQ65 SFTPA3P-201ENST00000446429 367 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC008026.1-201ENST00000460492 447 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC012181.1-201ENST00000479895 423 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC093303.1-201ENST00000514549 295 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 SNRPCP8-201ENST00000514820 211 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 COPS8P3-201ENST00000526024 482 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 AL121579.2-201ENST00000555466 590 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 SOD1P2-201ENST00000563903 451 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC007938.3-201ENST00000604965 623 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 AC005014.2-201ENST00000607795 599 ntBASIC7.45□□□□□ -1.22
USB1Q9BQ65 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms