Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC011447.7-201ENST00000624228 1590 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC092634.1-201ENST00000366505 199 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 Y_RNA.453-201ENST00000384223 109 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AL161909.1-201ENST00000397390 712 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AL136100.1-201ENST00000407696 330 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 BTF3P10-201ENST00000433415 495 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 USP9YP8-201ENST00000441913 500 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 GDI2P2-201ENST00000445131 608 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 PSPHP1-201ENST00000450062 261 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 MTND1P11-201ENST00000456661 876 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 SNORD42A-201ENST00000459584 64 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 MARK2P8-201ENST00000476069 952 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 FTH1P23-201ENST00000492727 550 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC091133.4-201ENST00000511142 308 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC010342.1-201ENST00000514047 877 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 IGHV3-63-201ENST00000518422 341 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC116917.1-201ENST00000520558 305 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 CENPUP1-201ENST00000526649 1202 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 NPIPB14P-203ENST00000532298 987 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AL138976.2-201ENST00000563989 694 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 UBE2FP2-201ENST00000566646 462 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC010287.1-201ENST00000566916 357 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 RN7SL835P-201ENST00000579920 262 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 MIR5682-201ENST00000584864 76 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC016629.2-201ENST00000597341 199 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC005084.1-201ENST00000605160 304 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AP002505.2-201ENST00000623585 696 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC129908.1-201ENST00000624553 648 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 MAPK10-377ENST00000642006 2752 ntBASIC7.77□□□□□ -1.17
RNF135Q8IUD6 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF135Q8IUD6 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 AL136298.2-201ENST00000556497 1570 ntBASIC7.76□□□□□ -1.17
RNF135Q8IUD6 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 AL359091.1-201ENST00000449048 1734 ntBASIC7.76□□□□□ -1.17
RNF135Q8IUD6 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 RN7SKP171-201ENST00000364417 303 ntBASIC7.76□□□□□ -1.17
RNF135Q8IUD6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF135Q8IUD6 MIR16-1-201ENST00000385271 89 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms