Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 CDY7P-201ENST00000429883 1604 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 MTND5P26-201ENST00000426018 1752 ntBASIC8.61□□□□□ -1.03
RC3H1Q5TC82 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.61□□□□□ -1.03
RC3H1Q5TC82 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AL353807.3-201ENST00000500626 2505 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AL451064.2-201ENST00000623514 1654 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 RN7SKP275-201ENST00000364626 301 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 RNU4-91P-201ENST00000364778 135 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 MIR188-201ENST00000385034 86 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 ST13P16-201ENST00000401760 781 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC002524.1-201ENST00000411687 547 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 VN1R36P-201ENST00000414936 291 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 NPM1P36-201ENST00000415681 835 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 PAICSP7-201ENST00000419829 962 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC108479.1-201ENST00000431142 427 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 RPL31P20-201ENST00000449593 360 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 MTCYBP18-201ENST00000501056 747 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC025459.1-201ENST00000504072 156 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AK4P6-201ENST00000505168 528 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC093824.1-201ENST00000508796 343 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 EEF1B2P2-201ENST00000519625 676 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AL049830.4-201ENST00000555149 351 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC012182.1-201ENST00000570133 895 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC008277.2-201ENST00000605196 797 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 SNORD96A-201ENST00000606577 79 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AL607023.1-201ENST00000620045 248 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AC135068.5-201ENST00000624197 983 ntBASIC8.6□□□□□ -1.03
RC3H1Q5TC82 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC8.6□□□□□ -1.03
RC3H1Q5TC82 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
RC3H1Q5TC82 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms