Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD48P09326 AP001284.1-201ENST00000528393 2118 ntBASIC5.63□□□□□ -1.51
CD48P09326 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD48P09326 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD48P09326 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
CD48P09326 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD48P09326 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD48P09326 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD48P09326 RNA5SP234-201ENST00000363916 119 ntBASIC5.63□□□□□ -1.51
CD48P09326 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.63□□□□□ -1.51
CD48P09326 TNPO1P1-201ENST00000423641 1138 ntBASIC5.63□□□□□ -1.51
CD48P09326 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.63□□□□□ -1.51
CD48P09326 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.63□□□□□ -1.51
CD48P09326 CYCSP51-201ENST00000443545 318 ntBASIC5.63□□□□□ -1.51
CD48P09326 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.63□□□□□ -1.51
CD48P09326 VN1R96P-201ENST00000446052 858 ntBASIC5.63□□□□□ -1.51
CD48P09326 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD48P09326 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.63□□□□□ -1.51
CD48P09326 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.63□□□□□ -1.51
CD48P09326 EIF3LP3-201ENST00000495197 822 ntBASIC5.63□□□□□ -1.51
CD48P09326 AP000926.3-201ENST00000497201 299 ntBASIC5.63□□□□□ -1.51
CD48P09326 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.63□□□□□ -1.51
CD48P09326 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.63□□□□□ -1.51
CD48P09326 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.63□□□□□ -1.51
CD48P09326 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.63□□□□□ -1.51
CD48P09326 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.63□□□□□ -1.51
CD48P09326 AP004607.2-201ENST00000533949 322 ntBASIC5.63□□□□□ -1.51
CD48P09326 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.63□□□□□ -1.51
CD48P09326 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.63□□□□□ -1.51
CD48P09326 LSM3P2-201ENST00000551246 273 ntBASIC5.63□□□□□ -1.51
CD48P09326 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.63□□□□□ -1.51
CD48P09326 MIR1273E-201ENST00000581165 102 ntBASIC5.63□□□□□ -1.51
CD48P09326 MIR3614-201ENST00000581261 86 ntBASIC5.63□□□□□ -1.51
CD48P09326 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.63□□□□□ -1.51
CD48P09326 AC008521.2-201ENST00000591021 259 ntBASIC5.63□□□□□ -1.51
CD48P09326 AC010487.1-201ENST00000594408 1172 ntBASIC5.63□□□□□ -1.51
CD48P09326 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.63□□□□□ -1.51
CD48P09326 AL133445.2-201ENST00000611191 527 ntBASIC5.63□□□□□ -1.51
CD48P09326 AC244107.2-201ENST00000611773 76 ntBASIC5.63□□□□□ -1.51
CD48P09326 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.63□□□□□ -1.51
CD48P09326 AP000550.3-201ENST00000637734 379 ntBASIC5.63□□□□□ -1.51
CD48P09326 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.63□□□□□ -1.51
CD48P09326 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.63□□□□□ -1.51
CD48P09326 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
CD48P09326 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD48P09326 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD48P09326 AC097634.1-201ENST00000604491 2467 ntBASIC5.63□□□□□ -1.51
CD48P09326 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD48P09326 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD48P09326 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.62□□□□□ -1.51
CD48P09326 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CD48P09326 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.62□□□□□ -1.51
CD48P09326 TMSB4XP4-201ENST00000323496 618 ntBASIC5.62□□□□□ -1.51
CD48P09326 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD48P09326 AL031985.1-201ENST00000392713 418 ntBASIC5.62□□□□□ -1.51
CD48P09326 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CD48P09326 DBIP1-201ENST00000401435 260 ntBASIC5.62□□□□□ -1.51
CD48P09326 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CD48P09326 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.62□□□□□ -1.51
CD48P09326 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD48P09326 AC012075.1-201ENST00000436549 580 ntBASIC5.62□□□□□ -1.51
CD48P09326 AC073909.1-201ENST00000447112 999 ntBASIC5.62□□□□□ -1.51
CD48P09326 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.62□□□□□ -1.51
CD48P09326 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.62□□□□□ -1.51
CD48P09326 RANP1-206ENST00000455094 651 ntBASIC5.62□□□□□ -1.51
CD48P09326 AC021193.1-201ENST00000511607 420 ntBASIC5.62□□□□□ -1.51
CD48P09326 MTND6P2-201ENST00000512226 524 ntBASIC5.62□□□□□ -1.51
CD48P09326 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.62□□□□□ -1.51
CD48P09326 AC087272.1-201ENST00000523624 533 ntBASIC5.62□□□□□ -1.51
CD48P09326 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.62□□□□□ -1.51
CD48P09326 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.62□□□□□ -1.51
CD48P09326 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.62□□□□□ -1.51
CD48P09326 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.62□□□□□ -1.51
CD48P09326 MIR7853-201ENST00000584820 132 ntBASIC5.62□□□□□ -1.51
CD48P09326 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD48P09326 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.62□□□□□ -1.51
CD48P09326 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD48P09326 RNA5SP440-201ENST00000612665 119 ntBASIC5.62□□□□□ -1.51
CD48P09326 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.62□□□□□ -1.51
CD48P09326 AC007683.2-201ENST00000624681 714 ntBASIC5.62□□□□□ -1.51
CD48P09326 AC099654.6-201ENST00000636487 512 ntBASIC5.62□□□□□ -1.51
CD48P09326 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CD48P09326 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD48P09326 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.62□□□□□ -1.51
CD48P09326 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.62□□□□□ -1.51
CD48P09326 Z83820.1-201ENST00000456978 1499 ntBASIC5.62□□□□□ -1.51
CD48P09326 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD48P09326 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD48P09326 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.62□□□□□ -1.51
CD48P09326 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CD48P09326 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD48P09326 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CD48P09326 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD48P09326 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD48P09326 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD48P09326 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CD48P09326 RNU4-2-201ENST00000365668 141 ntBASIC5.61□□□□□ -1.51
CD48P09326 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD48P09326 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CD48P09326 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms