Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 SSXP3-201ENST00000442971 1300 ntBASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 ZNF849P-201ENST00000594711 1566 ntBASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.92□□□□□ -1.46
SEC61A2Q9H9S3 BRD7P1-201ENST00000557705 1915 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AKAP17BP-201ENST00000431706 2719 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 TMCC1P1-201ENST00000518897 1980 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 NCLP2-201ENST00000416078 1462 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC013488.1-201ENST00000526618 1838 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 RNA5SP382-201ENST00000363355 112 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 Y_RNA.560-201ENST00000384689 102 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL590084.2-201ENST00000401481 382 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 ERHP2-201ENST00000402323 299 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL590635.1-201ENST00000406314 586 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL133264.1-201ENST00000407157 562 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 RN7SKP205-201ENST00000410999 307 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 RN7SKP296-201ENST00000411185 341 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC004074.1-201ENST00000421810 1063 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 RAC1P8-201ENST00000427086 527 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 RPS10P21-201ENST00000430654 475 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 SEPT14P24-201ENST00000447236 180 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL121578.2-201ENST00000448797 447 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC022080.2-201ENST00000452932 533 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL139156.3-201ENST00000454802 394 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 RPL5P14-201ENST00000494197 878 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC092851.1-201ENST00000535964 478 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 BLZF2P-201ENST00000553776 1130 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC005726.4-201ENST00000582858 458 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 MIR3611-201ENST00000584484 83 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC073544.2-201ENST00000601155 540 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 BUB1P1-201ENST00000603541 607 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC011451.2-201ENST00000604303 598 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL359513.1-201ENST00000614364 557 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC004241.2-201ENST00000614562 444 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC091932.2-201ENST00000623014 291 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC061999.1-201ENST00000624454 177 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AL662795.2-201ENST00000624252 3706 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 AC007159.1-201ENST00000566529 4706 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 CASC19-248ENST00000641674 1356 ntBASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SEC61A2Q9H9S3 MTND5P24-201ENST00000438892 1767 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 MKI67P1-201ENST00000604297 1460 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms