Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 AC243756.2-201ENST00000618406 463 ntBASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
CSMD1Q96PZ7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 AC108751.5-201ENST00000492880 1336 ntBASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 RN7SKP280-201ENST00000364196 304 ntBASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 AK3P5-201ENST00000432033 519 ntBASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 RPL6P5-201ENST00000445678 828 ntBASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 AC026726.1-201ENST00000512859 601 ntBASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 AC005225.5-201ENST00000623547 2225 ntBASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 MTCO1P15-201ENST00000529569 1526 ntBASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CSMD1Q96PZ7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 AL009179.1-201ENST00000406085 265 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 RPL36AP36-201ENST00000418616 301 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 OR4C10P-201ENST00000434991 931 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 FABP5P2-201ENST00000439042 408 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 Z95152.1-201ENST00000453556 656 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 AP000797.2-201ENST00000475768 606 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 TPM3P3-201ENST00000521343 354 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 AC007224.1-201ENST00000564410 144 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 VN1R85P-201ENST00000601587 426 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 CEACAMP8-201ENST00000413902 580 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 OR2B7P-201ENST00000429302 934 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 MTCO1P1-201ENST00000624263 1081 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 AC007996.1-201ENST00000620414 2821 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 MIR551A-201ENST00000385042 96 ntBASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CSMD1Q96PZ7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 ATP5F1P3-201ENST00000397213 657 ntBASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 HSPA8P15-201ENST00000401676 786 ntBASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 PHBP16-201ENST00000446318 950 ntBASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 RPL12P25-202ENST00000598100 674 ntBASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 AC100757.1-201ENST00000616872 1835 ntBASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CSMD1Q96PZ7 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms