Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.95□□□□□ -1.14
HLA-CQ95604 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 AC008739.5-201ENST00000623035 1938 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 CCDC150P1-201ENST00000537123 2215 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
HLA-CQ95604 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 PPBPP2-201ENST00000513150 1362 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 CKAP2P1-201ENST00000555477 2049 ntBASIC7.95□□□□□ -1.14
HLA-CQ95604 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
HLA-CQ95604 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
HLA-CQ95604 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 UGT2B25P-201ENST00000511504 1586 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.94□□□□□ -1.14
HLA-CQ95604 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
HLA-CQ95604 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
HLA-CQ95604 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
HLA-CQ95604 OR52B1P-201ENST00000316506 909 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.94□□□□□ -1.14
HLA-CQ95604 Y_RNA.25-201ENST00000362528 102 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 RNU6-492P-201ENST00000363035 104 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 SNORA75.4-201ENST00000391278 119 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.94□□□□□ -1.14
HLA-CQ95604 OR2B7P-201ENST00000429302 934 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 EIF5AP4-201ENST00000441206 465 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 CBWD4P-201ENST00000445695 655 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.94□□□□□ -1.14
HLA-CQ95604 MTND1P12-201ENST00000455231 147 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 AC018638.3-201ENST00000461273 132 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 RPL12P40-201ENST00000467028 488 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.94□□□□□ -1.14
HLA-CQ95604 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.94□□□□□ -1.14
HLA-CQ95604 RN7SL388P-201ENST00000498736 339 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 MIR4307-201ENST00000582802 84 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 AP001521.2-201ENST00000608772 546 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 AL031658.2-201ENST00000616850 651 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.94□□□□□ -1.14
HLA-CQ95604 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.94□□□□□ -1.14
HLA-CQ95604 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
HLA-CQ95604 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
HLA-CQ95604 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
HLA-CQ95604 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
HLA-CQ95604 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.94□□□□□ -1.14
HLA-CQ95604 AC024560.2-201ENST00000507981 1497 ntBASIC7.94□□□□□ -1.14
HLA-CQ95604 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 TRIM49D1-202ENST00000530311 2164 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC7.93□□□□□ -1.14
HLA-CQ95604 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
HLA-CQ95604 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 SNORA4.3-201ENST00000365564 137 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HLA-CQ95604 MIR187-201ENST00000385062 109 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
HLA-CQ95604 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
HLA-CQ95604 AL589647.1-201ENST00000402485 466 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AL122016.1-201ENST00000403365 367 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 MIR1282-201ENST00000408865 101 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 BCRP8-201ENST00000412037 255 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 SPA17P1-201ENST00000416656 452 ntBASIC7.93□□□□□ -1.14
HLA-CQ95604 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms