Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MIR4260-201ENST00000583107 67 ntBASIC4.75□□□□□ -1.65
BEST4Q8NFU0 AC090774.2-201ENST00000584708 322 ntBASIC4.75□□□□□ -1.65
BEST4Q8NFU0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.75□□□□□ -1.65
BEST4Q8NFU0 FAM60CP-201ENST00000591086 664 ntBASIC4.75□□□□□ -1.65
BEST4Q8NFU0 AC067838.1-201ENST00000606064 577 ntBASIC4.75□□□□□ -1.65
BEST4Q8NFU0 AC003001.2-201ENST00000616294 831 ntBASIC4.75□□□□□ -1.65
BEST4Q8NFU0 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.75□□□□□ -1.65
BEST4Q8NFU0 AC104820.1-201ENST00000624183 307 ntBASIC4.75□□□□□ -1.65
BEST4Q8NFU0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BEST4Q8NFU0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BEST4Q8NFU0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BEST4Q8NFU0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
BEST4Q8NFU0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
BEST4Q8NFU0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BEST4Q8NFU0 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.75□□□□□ -1.65
BEST4Q8NFU0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC019072.1-201ENST00000604535 1551 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC133552.1-201ENST00000569988 4007 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 OR1L6-202ENST00000373684 1044 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 RNU6-152P-201ENST00000384037 107 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 RPL21P67-201ENST00000402896 478 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 RN7SKP29-201ENST00000410957 272 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AL357752.1-201ENST00000412817 349 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AL035422.1-201ENST00000414193 397 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 OR6C64P-201ENST00000419708 825 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 GAPDHP48-201ENST00000436626 961 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 RAB9AP5-201ENST00000437794 597 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 PA2G4P1-201ENST00000442248 1197 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 RAB9AP2-201ENST00000443911 597 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC073909.1-201ENST00000447112 999 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC005077.1-201ENST00000449226 375 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 RNA5SP103-201ENST00000459503 118 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC016559.2-201ENST00000510759 359 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC139365.2-201ENST00000517972 253 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 OR5AM1P-201ENST00000532136 1032 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 SETP1-201ENST00000556014 845 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC092332.1-201ENST00000563684 829 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC096996.1-201ENST00000563813 325 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC005244.1-201ENST00000582566 339 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC090607.5-201ENST00000615692 224 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AL136228.1-201ENST00000622221 319 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC003973.3-201ENST00000624863 2822 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 TRIM51GP-201ENST00000534741 1350 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AC083843.2-201ENST00000568248 6253 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 AL731566.1-201ENST00000620490 1937 ntBASIC4.74□□□□□ -1.65
BEST4Q8NFU0 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 AP001642.1-201ENST00000624727 2117 ntBASIC4.73□□□□□ -1.65
BEST4Q8NFU0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 QRSL1P1-201ENST00000400977 1540 ntBASIC4.73□□□□□ -1.65
BEST4Q8NFU0 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 AC000374.1-201ENST00000434698 1745 ntBASIC4.73□□□□□ -1.65
BEST4Q8NFU0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 RNU6-618P-201ENST00000363518 112 ntBASIC4.73□□□□□ -1.65
BEST4Q8NFU0 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.73□□□□□ -1.65
BEST4Q8NFU0 AL136116.2-201ENST00000404020 785 ntBASIC4.73□□□□□ -1.65
BEST4Q8NFU0 RN7SKP286-201ENST00000410894 299 ntBASIC4.73□□□□□ -1.65
BEST4Q8NFU0 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms