Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 GNL2P1-201ENST00000451274 2190 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 TRIM51GP-201ENST00000534741 1350 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 RNA5SP232-201ENST00000364144 119 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 SNORA40.4-201ENST00000390971 128 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 OR5M12P-201ENST00000423388 929 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 DPY19L1P2-201ENST00000426647 915 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 RPSAP65-201ENST00000429660 595 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 BX119904.1-201ENST00000432026 348 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 TRIM60P16-201ENST00000444048 694 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AL445466.1-201ENST00000448432 357 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 SNRPCP3-201ENST00000474888 476 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 RN7SL568P-201ENST00000493069 298 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 MIR2117-201ENST00000516780 80 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC078899.1-201ENST00000521432 1185 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 OSBPL9P3-201ENST00000534523 595 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 GARSP1-201ENST00000570895 719 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 TXNP4-201ENST00000575018 310 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC138207.8-204ENST00000579588 527 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC068768.2-201ENST00000602352 343 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC023813.4-201ENST00000607580 580 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC004801.6-201ENST00000616571 978 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AL355974.3-201ENST00000617383 467 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AC007342.8-201ENST00000623278 678 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 FRG1DP-201ENST00000635586 771 ntBASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00346Q8IVM7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 AC004656.1-201ENST00000568479 4951 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 AC138907.8-201ENST00000623981 2256 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 RN7SKP128-201ENST00000364270 303 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 RNU6-185P-201ENST00000384421 107 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 RBBP4P5-201ENST00000398583 1266 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 AC002524.1-201ENST00000411687 547 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 AL445928.1-201ENST00000435545 222 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 AC096632.2-201ENST00000438139 1239 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 RPS12P17-201ENST00000438591 377 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 RPL34P26-201ENST00000445636 354 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 RNU7-27P-201ENST00000459281 62 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 AC078857.1-201ENST00000469870 667 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 AC098847.1-201ENST00000473094 348 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 NPM1P29-201ENST00000483112 803 ntBASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.2□□□□□ -1.58
LINC00346Q8IVM7 ST13P12-201ENST00000508958 1094 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms