Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.68□□□□□ -1.5
RAPH1Q70E73 NXF4-202ENST00000416098 1465 ntBASIC5.68□□□□□ -1.5
RAPH1Q70E73 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.68□□□□□ -1.5
RAPH1Q70E73 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.68□□□□□ -1.5
RAPH1Q70E73 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.68□□□□□ -1.5
RAPH1Q70E73 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAPH1Q70E73 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.68□□□□□ -1.5
RAPH1Q70E73 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAPH1Q70E73 AC112198.2-201ENST00000426589 6996 ntBASIC5.68□□□□□ -1.5
RAPH1Q70E73 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.68□□□□□ -1.5
RAPH1Q70E73 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAPH1Q70E73 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RAPH1Q70E73 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.68□□□□□ -1.5
RAPH1Q70E73 PDZK1P1-202ENST00000425209 1350 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAPH1Q70E73 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAPH1Q70E73 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAPH1Q70E73 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AL121886.1-201ENST00000358609 435 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 SNORA70.6-201ENST00000383934 134 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 CXADRP1-201ENST00000398098 1095 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AL357752.1-201ENST00000412817 349 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 HMGB1P32-201ENST00000425971 565 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 PNKDP1-201ENST00000435914 430 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC091874.2-201ENST00000505889 720 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC074255.1-201ENST00000511259 501 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 SCARNA18.1-201ENST00000516330 83 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 IGKV3D-25-201ENST00000519599 235 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 PCNAP4-201ENST00000532690 730 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAPH1Q70E73 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAPH1Q70E73 DHFRP1-201ENST00000579682 559 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 SNX6P1-201ENST00000601728 1224 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC006363.1-201ENST00000603806 463 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AL022394.1-201ENST00000606979 292 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC108673.3-201ENST00000609183 335 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 AC090607.5-201ENST00000615692 224 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 MIR6133-201ENST00000617057 108 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 CXADRP3-202ENST00000617265 1100 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAPH1Q70E73 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAPH1Q70E73 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAPH1Q70E73 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.67□□□□□ -1.5
RAPH1Q70E73 CASC19-281ENST00000642118 1554 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 TRIM51GP-201ENST00000534741 1350 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 CASC19-248ENST00000641674 1356 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 STX3-208ENST00000641815 3236 ntBASIC5.67□□□□□ -1.5
RAPH1Q70E73 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAPH1Q70E73 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 AC092681.1-201ENST00000297369 291 ntBASIC5.66□□□□□ -1.5
RAPH1Q70E73 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 RNU4-7P-201ENST00000364758 141 ntBASIC5.66□□□□□ -1.5
RAPH1Q70E73 AL136131.1-201ENST00000406079 803 ntBASIC5.66□□□□□ -1.5
RAPH1Q70E73 AL354890.1-201ENST00000413730 346 ntBASIC5.66□□□□□ -1.5
RAPH1Q70E73 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 NIFKP3-201ENST00000417799 865 ntBASIC5.66□□□□□ -1.5
RAPH1Q70E73 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 GLUD1P9-201ENST00000420997 1173 ntBASIC5.66□□□□□ -1.5
RAPH1Q70E73 AC007064.3-201ENST00000422608 359 ntBASIC5.66□□□□□ -1.5
RAPH1Q70E73 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 CCRL1P1-201ENST00000449542 1053 ntBASIC5.66□□□□□ -1.5
RAPH1Q70E73 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAPH1Q70E73 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 AC069277.2-201ENST00000454211 432 ntBASIC5.66□□□□□ -1.5
RAPH1Q70E73 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.66□□□□□ -1.5
RAPH1Q70E73 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms