Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MTND6P2-201ENST00000512226 524 ntBASIC5.63□□□□□ -1.51
CDH4P55283 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CDH4P55283 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.63□□□□□ -1.51
CDH4P55283 AP005403.1-201ENST00000579720 229 ntBASIC5.63□□□□□ -1.51
CDH4P55283 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH4P55283 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH4P55283 AL359513.1-201ENST00000614364 557 ntBASIC5.63□□□□□ -1.51
CDH4P55283 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH4P55283 SAMMSON-209ENST00000641222 1100 ntBASIC5.63□□□□□ -1.51
CDH4P55283 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH4P55283 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CDH4P55283 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH4P55283 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CDH4P55283 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH4P55283 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH4P55283 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CDH4P55283 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 AC138907.8-201ENST00000623981 2256 ntBASIC5.62□□□□□ -1.51
CDH4P55283 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 AL360270.2-201ENST00000562952 5985 ntBASIC5.62□□□□□ -1.51
CDH4P55283 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
CDH4P55283 RN7SKP229-201ENST00000410465 302 ntBASIC5.62□□□□□ -1.51
CDH4P55283 RN7SKP59-201ENST00000410520 314 ntBASIC5.62□□□□□ -1.51
CDH4P55283 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH4P55283 NPM1P4-201ENST00000414095 812 ntBASIC5.62□□□□□ -1.51
CDH4P55283 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH4P55283 RPL12P17-201ENST00000432393 498 ntBASIC5.62□□□□□ -1.51
CDH4P55283 CYCSP12-201ENST00000437729 300 ntBASIC5.62□□□□□ -1.51
CDH4P55283 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH4P55283 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.62□□□□□ -1.51
CDH4P55283 AL672138.1-201ENST00000450604 1015 ntBASIC5.62□□□□□ -1.51
CDH4P55283 AC018638.3-201ENST00000461273 132 ntBASIC5.62□□□□□ -1.51
CDH4P55283 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH4P55283 HMGB1P44-201ENST00000508597 572 ntBASIC5.62□□□□□ -1.51
CDH4P55283 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH4P55283 SNORA70.11-201ENST00000515987 138 ntBASIC5.62□□□□□ -1.51
CDH4P55283 SNORA70.13-201ENST00000516116 138 ntBASIC5.62□□□□□ -1.51
CDH4P55283 SCARNA16.4-201ENST00000516956 187 ntBASIC5.62□□□□□ -1.51
CDH4P55283 OR8Q1P-201ENST00000526467 655 ntBASIC5.62□□□□□ -1.51
CDH4P55283 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH4P55283 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH4P55283 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.62□□□□□ -1.51
CDH4P55283 BLZF2P-201ENST00000553776 1130 ntBASIC5.62□□□□□ -1.51
CDH4P55283 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH4P55283 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH4P55283 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 AP000864.1-201ENST00000609424 650 ntBASIC5.62□□□□□ -1.51
CDH4P55283 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH4P55283 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH4P55283 AC005618.4-201ENST00000625053 554 ntBASIC5.62□□□□□ -1.51
CDH4P55283 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH4P55283 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH4P55283 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDH4P55283 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH4P55283 CASC19-255ENST00000641733 1385 ntBASIC5.62□□□□□ -1.51
CDH4P55283 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 AL355488.2-201ENST00000609909 2850 ntBASIC5.62□□□□□ -1.51
CDH4P55283 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CDH4P55283 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 AC097063.1-201ENST00000426714 1797 ntBASIC5.62□□□□□ -1.51
CDH4P55283 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH4P55283 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
CDH4P55283 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH4P55283 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH4P55283 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH4P55283 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
CDH4P55283 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH4P55283 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH4P55283 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
CDH4P55283 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 AC092681.1-201ENST00000297369 291 ntBASIC5.61□□□□□ -1.51
CDH4P55283 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDH4P55283 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH4P55283 SRSF1P1-201ENST00000424058 520 ntBASIC5.61□□□□□ -1.51
CDH4P55283 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 PRUNEP1-201ENST00000425846 705 ntBASIC5.61□□□□□ -1.51
CDH4P55283 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH4P55283 CFL1P1-202ENST00000432948 411 ntBASIC5.61□□□□□ -1.51
CDH4P55283 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CDH4P55283 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH4P55283 KATNBL1P4-201ENST00000503545 918 ntBASIC5.61□□□□□ -1.51
CDH4P55283 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH4P55283 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH4P55283 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH4P55283 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CDH4P55283 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms