Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HTTP42858 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC5.66□□□□□ -1.5
HTTP42858 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
HTTP42858 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HTTP42858 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HTTP42858 AL121977.1-201ENST00000401636 979 ntBASIC5.65□□□□□ -1.5
HTTP42858 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HTTP42858 OR51B3P-201ENST00000412287 913 ntBASIC5.65□□□□□ -1.5
HTTP42858 RPL36AP36-201ENST00000418616 301 ntBASIC5.65□□□□□ -1.5
HTTP42858 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.65□□□□□ -1.5
HTTP42858 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.65□□□□□ -1.5
HTTP42858 AP000619.2-201ENST00000546014 969 ntBASIC5.65□□□□□ -1.5
HTTP42858 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HTTP42858 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HTTP42858 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.65□□□□□ -1.5
HTTP42858 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HTTP42858 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HTTP42858 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HTTP42858 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
HTTP42858 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HTTP42858 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HTTP42858 ERG-205ENST00000398910 4954 ntTSL 5 BASIC5.65□□□□□ -1.5
HTTP42858 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HTTP42858 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HTTP42858 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HTTP42858 AC016831.4-201ENST00000438302 307 ntBASIC5.65□□□□□ -1.5
HTTP42858 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.65□□□□□ -1.5
HTTP42858 MRPL35P2-201ENST00000448009 511 ntBASIC5.65□□□□□ -1.5
HTTP42858 RN7SL188P-201ENST00000469842 285 ntBASIC5.65□□□□□ -1.5
HTTP42858 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.65□□□□□ -1.5
HTTP42858 H3F3BP2-201ENST00000583907 357 ntBASIC5.65□□□□□ -1.5
HTTP42858 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HTTP42858 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.65□□□□□ -1.5
HTTP42858 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HTTP42858 AC015799.1-201ENST00000622996 3122 ntBASIC5.65□□□□□ -1.5
HTTP42858 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HTTP42858 CASC19-255ENST00000641733 1385 ntBASIC5.65□□□□□ -1.51
HTTP42858 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HTTP42858 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HTTP42858 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC5.65□□□□□ -1.51
HTTP42858 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
HTTP42858 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HTTP42858 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC5.65□□□□□ -1.51
HTTP42858 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
HTTP42858 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HTTP42858 ARL2BPP10-201ENST00000446487 531 ntBASIC5.65□□□□□ -1.51
HTTP42858 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.65□□□□□ -1.51
HTTP42858 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.65□□□□□ -1.51
HTTP42858 ENPP7P9-201ENST00000514456 627 ntBASIC5.65□□□□□ -1.51
HTTP42858 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.65□□□□□ -1.51
HTTP42858 AC012400.1-201ENST00000518452 381 ntBASIC5.65□□□□□ -1.51
HTTP42858 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.51
HTTP42858 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC5.65□□□□□ -1.51
HTTP42858 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HTTP42858 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.65□□□□□ -1.51
HTTP42858 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
HTTP42858 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.64□□□□□ -1.51
HTTP42858 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HTTP42858 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
HTTP42858 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.64□□□□□ -1.51
HTTP42858 SNORD56.6-201ENST00000384569 71 ntBASIC5.64□□□□□ -1.51
HTTP42858 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.64□□□□□ -1.51
HTTP42858 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.64□□□□□ -1.51
HTTP42858 AC008782.1-201ENST00000603386 430 ntBASIC5.64□□□□□ -1.51
HTTP42858 AL035461.2-201ENST00000619201 524 ntBASIC5.64□□□□□ -1.51
HTTP42858 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC5.64□□□□□ -1.51
HTTP42858 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HTTP42858 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC5.64□□□□□ -1.51
HTTP42858 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
HTTP42858 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.64□□□□□ -1.51
HTTP42858 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC5.64□□□□□ -1.51
HTTP42858 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.64□□□□□ -1.51
HTTP42858 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HTTP42858 U3.30-201ENST00000391308 210 ntBASIC5.64□□□□□ -1.51
HTTP42858 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.64□□□□□ -1.51
HTTP42858 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 AC004817.4-201ENST00000602396 3625 ntBASIC5.64□□□□□ -1.51
HTTP42858 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
HTTP42858 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HTTP42858 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HTTP42858 AL121657.1-201ENST00000327215 531 ntBASIC5.63□□□□□ -1.51
HTTP42858 NRBF2P3-201ENST00000432731 865 ntBASIC5.63□□□□□ -1.51
HTTP42858 RPL23AP83-201ENST00000434984 473 ntBASIC5.63□□□□□ -1.51
HTTP42858 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.63□□□□□ -1.51
HTTP42858 RN7SL542P-201ENST00000467147 294 ntBASIC5.63□□□□□ -1.51
HTTP42858 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.63□□□□□ -1.51
HTTP42858 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms