Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
LTBRP36941 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.55□□□□□ -1.36
LTBRP36941 CASC19-228ENST00000641414 1684 ntBASIC6.55□□□□□ -1.36
LTBRP36941 NCOA4P2-201ENST00000340589 1813 ntBASIC6.55□□□□□ -1.36
LTBRP36941 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.55□□□□□ -1.36
LTBRP36941 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LTBRP36941 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
LTBRP36941 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.54□□□□□ -1.36
LTBRP36941 AC104446.1-201ENST00000613728 1321 ntBASIC6.54□□□□□ -1.36
LTBRP36941 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LTBRP36941 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
LTBRP36941 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.54□□□□□ -1.36
LTBRP36941 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
LTBRP36941 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
LTBRP36941 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
LTBRP36941 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LTBRP36941 CHMP1B2P-201ENST00000399581 597 ntBASIC6.54□□□□□ -1.36
LTBRP36941 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.54□□□□□ -1.36
LTBRP36941 RN7SKP161-201ENST00000411110 305 ntBASIC6.54□□□□□ -1.36
LTBRP36941 DPPA2P3-201ENST00000411853 655 ntBASIC6.54□□□□□ -1.36
LTBRP36941 Z75741.2-201ENST00000417272 1167 ntBASIC6.54□□□□□ -1.36
LTBRP36941 CYCSP52-201ENST00000422857 310 ntBASIC6.54□□□□□ -1.36
LTBRP36941 MTCO3P30-201ENST00000426425 670 ntBASIC6.54□□□□□ -1.36
LTBRP36941 COX7BP2-201ENST00000437976 242 ntBASIC6.54□□□□□ -1.36
LTBRP36941 PPIAP10-201ENST00000438675 458 ntBASIC6.54□□□□□ -1.36
LTBRP36941 DEFA11P-201ENST00000446470 261 ntBASIC6.54□□□□□ -1.36
LTBRP36941 ELOCP30-201ENST00000447108 299 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AL050341.1-201ENST00000447743 313 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AURKAPS1-201ENST00000451805 1212 ntBASIC6.54□□□□□ -1.36
LTBRP36941 RPS27AP8-201ENST00000452665 445 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.54□□□□□ -1.36
LTBRP36941 RN7SL610P-201ENST00000463845 291 ntBASIC6.54□□□□□ -1.36
LTBRP36941 MTND3P7-201ENST00000474435 343 ntBASIC6.54□□□□□ -1.36
LTBRP36941 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.54□□□□□ -1.36
LTBRP36941 RN7SL561P-201ENST00000488553 281 ntBASIC6.54□□□□□ -1.36
LTBRP36941 HPRT1P2-201ENST00000505250 544 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.54□□□□□ -1.36
LTBRP36941 FABP5P12-201ENST00000515543 389 ntBASIC6.54□□□□□ -1.36
LTBRP36941 RNA5SP34-201ENST00000516887 130 ntBASIC6.54□□□□□ -1.36
LTBRP36941 MTCYBP19-201ENST00000517463 1124 ntBASIC6.54□□□□□ -1.36
LTBRP36941 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.54□□□□□ -1.36
LTBRP36941 IGLV2-28-201ENST00000520681 304 ntBASIC6.54□□□□□ -1.36
LTBRP36941 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.54□□□□□ -1.36
LTBRP36941 AP005639.1-201ENST00000526939 192 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.54□□□□□ -1.36
LTBRP36941 AP001804.2-201ENST00000533932 910 ntBASIC6.54□□□□□ -1.36
LTBRP36941 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.54□□□□□ -1.36
LTBRP36941 AC244502.2-201ENST00000543361 851 ntBASIC6.54□□□□□ -1.36
LTBRP36941 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 AC024909.2-201ENST00000553035 286 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AC135628.1-201ENST00000568867 534 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.54□□□□□ -1.36
LTBRP36941 AC010547.6-201ENST00000571789 193 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.54□□□□□ -1.36
LTBRP36941 AC021749.1-201ENST00000604322 607 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AC012557.1-201ENST00000607115 611 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AC006924.1-201ENST00000610750 559 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AC118658.2-201ENST00000618697 459 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AC010608.2-201ENST00000624830 470 ntBASIC6.54□□□□□ -1.36
LTBRP36941 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LTBRP36941 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.54□□□□□ -1.36
LTBRP36941 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 AC073342.2-201ENST00000595842 1800 ntBASIC6.54□□□□□ -1.36
LTBRP36941 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.54□□□□□ -1.36
LTBRP36941 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
LTBRP36941 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.54□□□□□ -1.36
LTBRP36941 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
LTBRP36941 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 AC022325.1-201ENST00000502748 2199 ntBASIC6.54□□□□□ -1.36
LTBRP36941 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.54□□□□□ -1.36
LTBRP36941 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LTBRP36941 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.54□□□□□ -1.36
LTBRP36941 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LTBRP36941 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LTBRP36941 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.53□□□□□ -1.36
LTBRP36941 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LTBRP36941 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LTBRP36941 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
LTBRP36941 AL049737.1-201ENST00000413920 1403 ntBASIC6.53□□□□□ -1.36
LTBRP36941 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LTBRP36941 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LTBRP36941 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LTBRP36941 AC007485.2-201ENST00000623493 1667 ntBASIC6.53□□□□□ -1.36
LTBRP36941 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LTBRP36941 MIR142-201ENST00000384835 87 ntBASIC6.53□□□□□ -1.36
LTBRP36941 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LTBRP36941 TNPO1P1-201ENST00000423641 1138 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms