Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 APOOP1-201ENST00000604695 592 ntBASIC8.21□□□□□ -1.1
COL9A1P20849 AL008723.3-201ENST00000608926 449 ntBASIC8.21□□□□□ -1.1
COL9A1P20849 AL161931.1-201ENST00000612768 246 ntBASIC8.21□□□□□ -1.1
COL9A1P20849 AC083806.3-201ENST00000614016 455 ntBASIC8.21□□□□□ -1.1
COL9A1P20849 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC8.21□□□□□ -1.1
COL9A1P20849 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
COL9A1P20849 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL9A1P20849 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
COL9A1P20849 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL9A1P20849 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC8.21□□□□□ -1.1
COL9A1P20849 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.21□□□□□ -1.1
COL9A1P20849 CASC15-203ENST00000605917 4461 ntBASIC8.21□□□□□ -1.1
COL9A1P20849 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL9A1P20849 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC8.21□□□□□ -1.1
COL9A1P20849 AC061975.7-201ENST00000592016 2692 ntBASIC8.21□□□□□ -1.1
COL9A1P20849 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.21□□□□□ -1.1
COL9A1P20849 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL9A1P20849 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
COL9A1P20849 EDA-213ENST00000616899 4643 ntTSL 5 BASIC8.21□□□□□ -1.1
COL9A1P20849 CAV1-201ENST00000341049 2704 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL9A1P20849 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC8.21□□□□□ -1.1
COL9A1P20849 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
COL9A1P20849 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL9A1P20849 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
COL9A1P20849 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL9A1P20849 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC8.2□□□□□ -1.1
COL9A1P20849 FP325330.3-201ENST00000623760 9537 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
COL9A1P20849 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 AC090337.1-201ENST00000579651 2074 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC8.2□□□□□ -1.1
COL9A1P20849 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
COL9A1P20849 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
COL9A1P20849 MDM4-202ENST00000367180 547 ntTSL 3 BASIC8.2□□□□□ -1.1
COL9A1P20849 RNU6-769P-201ENST00000384407 104 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 Y_RNA.489-201ENST00000384410 101 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AC092952.1-201ENST00000397646 1209 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AL121834.1-202ENST00000404494 277 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 MIR320C1-201ENST00000408566 88 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 RN7SKP266-201ENST00000410232 287 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 RNU2-64P-201ENST00000411315 191 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC8.2□□□□□ -1.1
COL9A1P20849 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC8.2□□□□□ -1.1
COL9A1P20849 AC099344.1-201ENST00000433548 492 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 RPS3AP52-201ENST00000435639 297 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 LSM1P1-201ENST00000438629 273 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC8.2□□□□□ -1.1
COL9A1P20849 BTF3P5-201ENST00000457252 467 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AC002075.1-201ENST00000457396 676 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AC110749.1-201ENST00000462007 357 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC8.2□□□□□ -1.1
COL9A1P20849 RPS3P7-201ENST00000488662 726 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 TMEM248P1-201ENST00000510579 951 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AC116917.1-201ENST00000520558 305 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC8.2□□□□□ -1.1
COL9A1P20849 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC8.2□□□□□ -1.1
COL9A1P20849 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.2□□□□□ -1.1
COL9A1P20849 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC8.2□□□□□ -1.1
COL9A1P20849 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC8.2□□□□□ -1.1
COL9A1P20849 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.2□□□□□ -1.1
COL9A1P20849 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC8.2□□□□□ -1.1
COL9A1P20849 UBE2CP4-201ENST00000561405 535 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC8.2□□□□□ -1.1
COL9A1P20849 RN7SL426P-201ENST00000579106 295 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC8.2□□□□□ -1.1
COL9A1P20849 AC104785.1-201ENST00000603220 588 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 BCRP9-201ENST00000605312 388 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AC073593.1-201ENST00000624500 411 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 AL133216.2-202ENST00000634512 349 ntBASIC8.2□□□□□ -1.1
COL9A1P20849 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
COL9A1P20849 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.2□□□□□ -1.1
COL9A1P20849 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 PUS7L-202ENST00000416848 4364 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.2□□□□□ -1.1
COL9A1P20849 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL9A1P20849 MR1-205ENST00000434571 7479 ntTSL 5 BASIC8.2□□□□□ -1.1
COL9A1P20849 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
COL9A1P20849 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC8.19□□□□□ -1.1
COL9A1P20849 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC8.19□□□□□ -1.1
COL9A1P20849 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 ACTBP13-201ENST00000423971 3959 ntBASIC8.19□□□□□ -1.1
COL9A1P20849 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
COL9A1P20849 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.19□□□□□ -1.1
COL9A1P20849 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC8.19□□□□□ -1.1
COL9A1P20849 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC8.19□□□□□ -1.1
COL9A1P20849 AC011493.1-201ENST00000596753 1632 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms