Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AP000769.2-201ENST00000602344 396 ntBASIC5.57□□□□□ -1.52
RIPK2O43353 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.57□□□□□ -1.52
RIPK2O43353 AC025574.2-201ENST00000615621 514 ntBASIC5.57□□□□□ -1.52
RIPK2O43353 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.57□□□□□ -1.52
RIPK2O43353 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.57□□□□□ -1.52
RIPK2O43353 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RIPK2O43353 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RIPK2O43353 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RIPK2O43353 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RIPK2O43353 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIPK2O43353 STX3-208ENST00000641815 3236 ntBASIC5.57□□□□□ -1.52
RIPK2O43353 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RIPK2O43353 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK2O43353 MRRFP1-201ENST00000435941 1675 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK2O43353 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK2O43353 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RIPK2O43353 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RIPK2O43353 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.56□□□□□ -1.52
RIPK2O43353 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK2O43353 SNORA64.1-201ENST00000362600 132 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.56□□□□□ -1.52
RIPK2O43353 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK2O43353 RAB9AP4-201ENST00000415230 609 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.56□□□□□ -1.52
RIPK2O43353 MTCO1P51-201ENST00000427672 1060 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 RPL12P18-201ENST00000437175 325 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK2O43353 AC007383.1-201ENST00000445875 636 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK2O43353 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RIPK2O43353 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.56□□□□□ -1.52
RIPK2O43353 RPS3AP15-201ENST00000483874 781 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 RPL15P21-201ENST00000495592 567 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK2O43353 RNA5SP340-201ENST00000517132 107 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 NPM1P52-201ENST00000518264 846 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 AC100784.1-201ENST00000522790 310 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK2O43353 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.56□□□□□ -1.52
RIPK2O43353 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.56□□□□□ -1.52
RIPK2O43353 AC084759.1-201ENST00000561168 290 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 AC124916.2-201ENST00000604416 224 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 FAM27E4-201ENST00000605259 342 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK2O43353 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.56□□□□□ -1.52
RIPK2O43353 AC244107.2-201ENST00000611773 76 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 uc_338.29-201ENST00000615099 168 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 SAMMSON-227ENST00000642114 1199 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.56□□□□□ -1.52
RIPK2O43353 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK2O43353 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK2O43353 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.56□□□□□ -1.52
RIPK2O43353 AC093225.1-201ENST00000506867 1408 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 AC114947.2-201ENST00000565748 2125 ntBASIC5.56□□□□□ -1.52
RIPK2O43353 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RIPK2O43353 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.55□□□□□ -1.52
RIPK2O43353 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.55□□□□□ -1.52
RIPK2O43353 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK2O43353 THAP12P5-201ENST00000405864 2275 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK2O43353 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RIPK2O43353 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
RIPK2O43353 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RIPK2O43353 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RIPK2O43353 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK2O43353 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK2O43353 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RIPK2O43353 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK2O43353 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK2O43353 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK2O43353 RBBP4P5-201ENST00000398583 1266 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 EI24P3-201ENST00000399046 1062 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK2O43353 AC211486.3-201ENST00000412694 621 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 OR51A6P-201ENST00000418680 1004 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 AK4P4-201ENST00000419465 646 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK2O43353 ATP5LP2-201ENST00000440646 311 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.55□□□□□ -1.52
RIPK2O43353 HSPE1P22-201ENST00000456856 327 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 OR11I1P-201ENST00000486033 954 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK2O43353 AC113191.1-201ENST00000517759 403 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.55□□□□□ -1.52
RIPK2O43353 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.55□□□□□ -1.52
RIPK2O43353 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK2O43353 AC007956.1-201ENST00000555623 542 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.55□□□□□ -1.52
RIPK2O43353 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.55□□□□□ -1.52
RIPK2O43353 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.55□□□□□ -1.52
RIPK2O43353 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.55□□□□□ -1.52
RIPK2O43353 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK2O43353 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RIPK2O43353 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.55□□□□□ -1.52
RIPK2O43353 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
RIPK2O43353 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.55□□□□□ -1.52
RIPK2O43353 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.55□□□□□ -1.52
RIPK2O43353 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.55□□□□□ -1.52
RIPK2O43353 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms