Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LSM3P4-201ENST00000502948 309 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AC006512.2-201ENST00000543250 486 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AC063977.5-201ENST00000601044 974 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AC133794.1-201ENST00000602731 914 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 FAM27E4-201ENST00000605259 342 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AL592429.1-201ENST00000403909 1473 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 Z83820.1-201ENST00000456978 1499 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AC020656.2-201ENST00000613291 5309 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 NLRP3P1-201ENST00000622303 1785 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC009501.3-201ENST00000605001 1352 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 RNU1-65P-201ENST00000363919 148 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 RNA5SP30-201ENST00000365552 115 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 U3.28-201ENST00000391249 210 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 RPS27AP6-201ENST00000427962 448 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AL606490.7-201ENST00000433136 191 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 NANOGP9-201ENST00000439890 892 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC015864.1-201ENST00000496512 544 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 SEPT10P1-201ENST00000517342 1162 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC027369.2-201ENST00000528030 440 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC008147.3-201ENST00000548666 354 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 DPPA2P4-201ENST00000563717 878 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 COX6CP7-201ENST00000597056 208 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC004775.1-201ENST00000607389 753 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 MIR6889-201ENST00000613185 59 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AL034546.1-201ENST00000623740 3693 ntBASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TCRBV7S3A2A0A539 AC093909.5-201ENST00000621839 1799 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 ABCA11P-202ENST00000504019 2110 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 NAMPTP1-201ENST00000440465 2514 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 MIR1203-201ENST00000408812 85 ntBASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.72□□□□□ -1.49
TCRBV7S3A2A0A539 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms