Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 RN7SL515P-201ENST00000463999 297 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 CBX1P5-201ENST00000475330 559 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 RN7SL193P-201ENST00000491708 276 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC015864.1-201ENST00000496512 544 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC096754.1-201ENST00000508904 818 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 SCARNA18.1-201ENST00000516330 83 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AP001858.2-201ENST00000536213 601 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 GCSHP4-201ENST00000538792 439 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC090651.1-201ENST00000567865 634 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC124283.4-201ENST00000581815 456 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 Z82195.1-201ENST00000604558 398 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC121247.2-201ENST00000604776 136 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AL133507.1-201ENST00000605269 557 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 AC063952.1-203ENST00000634410 658 ntBASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.97□□□□□ -1.29
PDLIM7Q9NR12 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PDLIM7Q9NR12 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PDLIM7Q9NR12 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.96□□□□□ -1.29
PDLIM7Q9NR12 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PDLIM7Q9NR12 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
PDLIM7Q9NR12 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.96□□□□□ -1.29
PDLIM7Q9NR12 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
PDLIM7Q9NR12 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.96□□□□□ -1.29
PDLIM7Q9NR12 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PDLIM7Q9NR12 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 RNU1-134P-201ENST00000362935 165 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 Z86062.1-201ENST00000406773 777 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 MIR1203-201ENST00000408812 85 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 Y_RNA.599-201ENST00000410489 109 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC017078.1-201ENST00000416146 368 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 VN1R31P-201ENST00000417498 730 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 TRGV6-201ENST00000417928 299 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AL365396.1-201ENST00000430854 671 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 UBE2D3P1-201ENST00000436669 444 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 PCBP2P1-201ENST00000437262 977 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC092967.1-201ENST00000449016 481 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 GOLGA5P1-201ENST00000507317 980 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 SNORA3.4-201ENST00000515969 96 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 RN7SKP98-201ENST00000517070 156 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 OR5D2P-201ENST00000524390 911 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC027807.1-201ENST00000559921 996 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC009120.3-201ENST00000563335 499 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC233702.7-202ENST00000582941 211 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC079880.2-201ENST00000603790 1213 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AL513218.1-201ENST00000606527 391 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 PART1_2.1-201ENST00000612397 250 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 MIR7159-201ENST00000620587 66 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AP002782.1-201ENST00000623107 614 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AL034408.1-201ENST00000637712 664 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC061975.7-201ENST00000592016 2692 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms