Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC009271.1-201ENST00000589440 518 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 UNC45B-203ENST00000591048 2553 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 RPL30P11-203ENST00000598995 310 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC008555.5-202ENST00000604749 570 ntTSL 4 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AL590032.1-201ENST00000604920 252 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC007128.2-202ENST00000606016 543 ntTSL 4 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AL392183.1-201ENST00000606622 2436 ntTSL 4 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC007663.4-201ENST00000608275 631 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 MIR7847-201ENST00000610912 103 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 IGKV1D-13-201ENST00000611391 376 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 PAEP-209ENST00000611414 729 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC006329.2-201ENST00000611491 394 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CDC42EP3-206ENST00000611976 5124 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AP003419.3-201ENST00000613900 527 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CR848007.3-201ENST00000615762 228 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 BX510359.6-201ENST00000615765 343 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 Metazoa_SRP.88-201ENST00000615890 269 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC068831.7-201ENST00000616954 363 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 KRTAP4-7-202ENST00000621138 423 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AL513478.1-201ENST00000621265 228 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 Vax2os1_3.1-201ENST00000622578 197 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC009336.3-201ENST00000623777 2620 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC002090.1-201ENST00000625000 2138 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC01002-226ENST00000633344 806 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC055839.1-201ENST00000634467 498 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC073264.4-201ENST00000638055 623 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 GLDC-211ENST00000639318 2009 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC007241.1-202ENST00000641637 835 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AC073869.8-201ENST00000641806 335 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CYP2F2P-202ENST00000641827 1004 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 KCTD7-207ENST00000639879 5098 ntTSL 4 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SLFN11-201ENST00000308377 4910 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CDH23-213ENST00000619887 4224 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ATP2B3-205ENST00000393842 4064 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 MTCL1-207ENST00000518815 3963 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CTNNA2-214ENST00000496558 3839 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ICE2-213ENST00000561114 3796 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 PLEKHS1-201ENST00000354462 3403 ntTSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SNX20-201ENST00000300590 3304 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ALDH1L1-203ENST00000393434 3277 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 CAPN2-202ENST00000433674 3264 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 RANBP3-202ENST00000340578 3233 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 PRPF4-202ENST00000374199 3212 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 FAM13B-202ENST00000420893 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 TPM3-212ENST00000368533 3131 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 EIF3C-202ENST00000395587 3137 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF599-201ENST00000329285 3099 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SRSF10-203ENST00000343255 2917 ntAPPRIS ALT1 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 AP1B1-205ENST00000415447 2838 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 C8orf17-202ENST00000625034 2775 ntBASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 RAD9B-204ENST00000409300 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 SIRPB2-201ENST00000359801 2642 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 ST6GALNAC1-201ENST00000156626 2570 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 GABPA-201ENST00000354828 5120 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
KRTAP4-4Q9BYR3 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 UIMC1-212ENST00000511320 2502 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 FCHO2-202ENST00000430046 4981 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PDK2-216ENST00000614357 2493 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 DLG3-210ENST00000542398 4529 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ZNF19-205ENST00000564230 2205 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRTAP4-4Q9BYR3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 207.2 ms