Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MIR3157-201ENST00000578688 85 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 RN7SL66P-201ENST00000582099 264 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC233280.2-201ENST00000603917 1070 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AL136131.3-201ENST00000607600 188 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC092435.4-201ENST00000623012 4159 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC008627.1-201ENST00000517511 1704 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 AC093225.1-201ENST00000506867 1408 ntBASIC4.12□□□□□ -1.75
AP1S3Q96PC3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
AP1S3Q96PC3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 RN7SKP77-201ENST00000363261 353 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AL359643.1-201ENST00000404109 423 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 RN7SKP108-201ENST00000411367 328 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 RPL35AP3-201ENST00000414680 288 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 RIMKLBP2-201ENST00000424737 654 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AC104843.2-201ENST00000427666 297 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 NANOGP9-201ENST00000439890 892 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 RN7SL254P-201ENST00000460609 284 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 RPS7P10-201ENST00000464254 603 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 RN7SL269P-201ENST00000467795 305 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AC098976.1-201ENST00000513014 541 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AP006245.2-201ENST00000522004 300 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AGGF1P7-201ENST00000562369 913 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 DHFRP1-201ENST00000579682 559 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AC015660.5-201ENST00000623238 564 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AL357140.4-201ENST00000636827 412 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 CASC19-221ENST00000641309 1382 ntBASIC4.11□□□□□ -1.75
AP1S3Q96PC3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
AP1S3Q96PC3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 AC097461.1-201ENST00000568928 2821 ntBASIC4.1□□□□□ -1.75
AP1S3Q96PC3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 RNA5SP326-201ENST00000363209 110 ntBASIC4.1□□□□□ -1.75
AP1S3Q96PC3 TRAV35-201ENST00000390462 330 ntBASIC4.1□□□□□ -1.75
AP1S3Q96PC3 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 RNA5SP231-201ENST00000410496 138 ntBASIC4.1□□□□□ -1.75
AP1S3Q96PC3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.1□□□□□ -1.75
AP1S3Q96PC3 MTND6P12-201ENST00000428247 522 ntBASIC4.1□□□□□ -1.75
AP1S3Q96PC3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms