Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RAB28P3-201ENST00000448325 597 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 RPL12P24-201ENST00000474907 486 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 STRADBP1-201ENST00000478954 1281 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 TRAV31-201ENST00000502780 342 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 OR4D12P-201ENST00000509361 911 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC093770.1-201ENST00000511559 571 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AP003355.1-201ENST00000518956 587 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 OR1E3-201ENST00000575608 948 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 RN7SL339P-201ENST00000580597 296 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC134669.1-201ENST00000581275 672 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC023762.1-201ENST00000603280 584 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 QTRT1P1-201ENST00000604344 1078 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AP001437.1-201ENST00000608783 456 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC004477.3-201ENST00000614061 590 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 SNORA11.6-201ENST00000619030 128 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC129778.1-202ENST00000623812 261 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AL591379.1-207ENST00000635982 261 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 OR7A1P-202ENST00000641542 1158 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC017002.4-201ENST00000604721 1525 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 MTCO1P4-201ENST00000520516 1409 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 Z83820.1-201ENST00000456978 1499 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 COX6B1P3-201ENST00000312310 260 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC023490.2-201ENST00000359859 470 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AL096800.1-201ENST00000405326 893 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 RN7SKP151-201ENST00000410230 316 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC130360.1-201ENST00000425489 1117 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 OR3D1P-201ENST00000438288 955 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 MTND1P26-201ENST00000440488 538 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC245517.2-201ENST00000442890 346 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC097463.1-201ENST00000447288 481 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 BUD31P2-201ENST00000449374 300 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC104629.2-201ENST00000468627 598 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC094085.1-201ENST00000468914 584 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC015864.1-201ENST00000496512 544 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 HMGB1P3-201ENST00000502802 616 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC016550.3-201ENST00000515706 767 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC130365.2-201ENST00000525882 1201 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 GLRXP2-201ENST00000555594 321 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 YWHAZP1-201ENST00000556286 722 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC092332.1-201ENST00000563684 829 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 MIR3189-201ENST00000578735 73 ntBASIC5.92□□□□□ -1.46
VPS50Q96JG6 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS50Q96JG6 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms