Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS3Q8IXF0 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
NPAS3Q8IXF0 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS3Q8IXF0 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
NPAS3Q8IXF0 MTND5P6-201ENST00000422338 1798 ntBASIC7.64□□□□□ -1.19
NPAS3Q8IXF0 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AL451064.2-201ENST00000623514 1654 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 DCAF13P1-201ENST00000495256 1330 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 SNORA70.5-201ENST00000365519 135 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 MIR551B-201ENST00000384984 96 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 ST13P16-201ENST00000401760 781 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 HMGB3P18-201ENST00000406327 590 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 SNORA3.1-201ENST00000408166 111 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 RN7SKP240-201ENST00000410583 375 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 ZNF90P2-204ENST00000419323 1075 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 EIF4A1P1-201ENST00000420241 934 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AL035410.1-201ENST00000427409 427 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 SNRPGP6-201ENST00000451124 220 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 MTCO3P11-201ENST00000455103 774 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 OR7E7P-201ENST00000455678 1012 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 MED28P7-201ENST00000456611 530 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC079193.1-201ENST00000460497 588 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC005165.2-201ENST00000466070 380 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 RPSAP48-201ENST00000466509 889 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 RN7SL790P-201ENST00000474043 298 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 DUTP7-201ENST00000507982 486 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AF131216.2-201ENST00000512316 564 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 SEPT14P4-201ENST00000513445 186 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AP001893.2-201ENST00000526949 202 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC090424.1-201ENST00000535243 736 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC089984.3-201ENST00000552838 363 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AL049830.4-201ENST00000555149 351 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 MIR5682-201ENST00000584864 76 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC012254.4-201ENST00000588843 273 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 pRNA.12-201ENST00000614353 90 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 pRNA.3-201ENST00000615048 90 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AL121890.2-201ENST00000617644 465 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 AC022509.4-201ENST00000621404 572 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 OR7E161P-202ENST00000641994 1033 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS3Q8IXF0 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms