Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 MIR4271-201ENST00000582451 67 ntBASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AC024267.2-201ENST00000582737 417 ntBASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AL117336.2-201ENST00000602435 335 ntBASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AL390208.1-201ENST00000605885 644 ntBASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AC098614.4-201ENST00000607601 462 ntBASIC7.8□□□□□ -1.16
RNF135Q8IUD6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AL031777.2-201ENST00000611953 196 ntBASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AC138649.3-201ENST00000622154 254 ntBASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AC073348.1-201ENST00000623002 331 ntBASIC7.8□□□□□ -1.16
RNF135Q8IUD6 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AL132796.3-201ENST00000624703 900 ntBASIC7.8□□□□□ -1.16
RNF135Q8IUD6 FER-210ENST00000628534 558 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AC100871.1-201ENST00000507871 1456 ntBASIC7.8□□□□□ -1.16
RNF135Q8IUD6 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF135Q8IUD6 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AC090643.1-201ENST00000623600 3100 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 Y_RNA.9-201ENST00000362354 101 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 MT-TP-201ENST00000387461 68 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 LDHAP5-201ENST00000394996 622 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AL590002.1-201ENST00000406554 418 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 SNORA2C-201ENST00000408564 137 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 VN1R20P-201ENST00000425215 966 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 FMO7P-201ENST00000436045 768 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 UBE2FP3-201ENST00000436366 524 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 OR13K1P-201ENST00000444577 975 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AC239367.2-201ENST00000447309 705 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 RPL7P31-201ENST00000450192 724 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 OR7E7P-201ENST00000455678 1012 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 ARPC3P2-201ENST00000457786 533 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AC090013.1-201ENST00000485147 480 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AC008628.2-201ENST00000502605 298 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 TECRP2-201ENST00000503270 928 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AC233724.1-201ENST00000503894 233 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 OR7E163P-201ENST00000505943 894 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 NPM1P21-201ENST00000513394 762 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 SNX18P27-201ENST00000523611 779 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AP003084.1-201ENST00000524828 742 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 SDHCP4-201ENST00000532834 510 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AC020914.6-201ENST00000594327 272 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 AC090578.1-201ENST00000604955 591 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 PPBPP2-201ENST00000513150 1362 ntBASIC7.79□□□□□ -1.16
RNF135Q8IUD6 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF135Q8IUD6 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms