Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC090181.3-201ENST00000624777 1514 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 SNORD56.2-201ENST00000363242 71 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 Y_RNA.216-201ENST00000364205 93 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 SNORA70G-201ENST00000383923 142 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 MIR606-201ENST00000384851 96 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC113608.1-201ENST00000398740 305 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC004987.3-201ENST00000413879 771 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 PTP4A1P1-201ENST00000420539 515 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 RBM22P7-201ENST00000421321 280 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC093107.1-201ENST00000422772 609 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AL121776.1-201ENST00000429337 372 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 FAM96AP1-201ENST00000430879 482 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC005002.1-201ENST00000447458 540 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AL451074.4-201ENST00000447545 470 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 RN7SL751P-201ENST00000473281 284 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 RPS3AP14-201ENST00000483907 780 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC022447.3-201ENST00000506865 495 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 OR10J9P-201ENST00000511932 987 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC087808.1-201ENST00000520501 361 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 IGKV2-29-201ENST00000521304 372 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 OR4C2P-201ENST00000530855 1064 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 RPS28P1-201ENST00000604589 187 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 MEMO1P5-201ENST00000604810 406 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 CUX2P1-201ENST00000606426 298 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC027807.2-201ENST00000616099 408 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC243830.2-201ENST00000618067 630 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 PART1_3.1-201ENST00000619680 131 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC073862.4-201ENST00000622982 854 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC087893.2-201ENST00000623272 255 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AC241377.2-202ENST00000636462 997 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 AL391262.1-201ENST00000556558 1992 ntBASIC7.48□□□□□ -1.21
LYSMD3Q7Z3D4 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 MRPS17P1-201ENST00000596009 3130 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 HYDIN2-203ENST00000614586 13885 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 RPL21P132-201ENST00000331267 462 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 Y_RNA.58-201ENST00000362807 102 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 RNU5F-6P-201ENST00000362979 116 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 Y_RNA.154-201ENST00000363624 102 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 RNY3P1-201ENST00000365085 102 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 RNY3-201ENST00000365484 102 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 Y_RNA.490-201ENST00000384413 102 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 SNORD65.1-201ENST00000390889 71 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 RNU6-575P-201ENST00000411326 105 ntBASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.47□□□□□ -1.21
LYSMD3Q7Z3D4 RPS3AP9-201ENST00000417027 792 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms