Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
CCDC144BQ3MJ40 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 PROS2P-201ENST00000474651 1951 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC017007.4-201ENST00000503353 1352 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC092070.2-203ENST00000598377 3644 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC125238.2-201ENST00000430003 1440 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 RNU6-452P-201ENST00000384406 107 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 RNU6-185P-201ENST00000384421 107 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 RNU6-244P-201ENST00000391028 104 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AL050335.1-201ENST00000396909 869 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 HMGB3P7-201ENST00000400214 611 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 RPL7P27-201ENST00000403775 720 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 RN7SKP161-201ENST00000411110 305 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 CYCSP52-201ENST00000422857 310 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AL157884.1-201ENST00000424561 454 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 DPY19L1P2-201ENST00000426647 915 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 MTATP6P17-201ENST00000431030 672 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC003989.1-201ENST00000434569 565 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 CACYBPP1-201ENST00000438592 684 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 RPL7L1P3-201ENST00000455249 689 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC104109.1-201ENST00000498563 436 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 SNORA19.3-201ENST00000516165 130 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 IGHV4-55-201ENST00000520889 368 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AL132857.1-201ENST00000555180 708 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 MTCYBP23-201ENST00000558717 1102 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 ZNF971P-201ENST00000562068 1249 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC068313.1-201ENST00000604028 1008 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC024255.1-201ENST00000614376 102 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 FAM27E2-201ENST00000619668 403 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 MSL3P1-202ENST00000440028 1468 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 VPS35P1-201ENST00000563400 1518 ntBASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC144BQ3MJ40 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
CCDC144BQ3MJ40 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CCDC144BQ3MJ40 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CCDC144BQ3MJ40 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CCDC144BQ3MJ40 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7.21□□□□□ -1.25
CCDC144BQ3MJ40 AC010401.2-201ENST00000575137 4934 ntBASIC7.21□□□□□ -1.25
CCDC144BQ3MJ40 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.21□□□□□ -1.25
CCDC144BQ3MJ40 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 RNA5SP110-201ENST00000362638 115 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 SNORD16-201ENST00000362803 99 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 RNU6-236P-201ENST00000363886 106 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 RNU6-932P-201ENST00000391108 106 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 RPL5P19-201ENST00000404228 893 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 HMGB3P31-201ENST00000413333 595 ntBASIC7.21□□□□□ -1.26
CCDC144BQ3MJ40 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms