Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-EP13747 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-EP13747 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-EP13747 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HLA-EP13747 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-EP13747 RNA5SP326-201ENST00000363209 110 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 RN7SKP6-201ENST00000364795 319 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 MIR551A-201ENST00000385042 96 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HLA-EP13747 RN7SKP125-201ENST00000410481 302 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-EP13747 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-EP13747 AL139148.1-201ENST00000427122 680 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 KRT8P51-201ENST00000438938 274 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-EP13747 RN7SL172P-201ENST00000460535 303 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 AC004453.1-201ENST00000487895 408 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 PGAM1P13-201ENST00000507497 754 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-EP13747 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HLA-EP13747 AC078878.1-201ENST00000539832 958 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.63□□□□□ -1.51
HLA-EP13747 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-EP13747 AC125494.2-201ENST00000602431 657 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 HIRAP1-201ENST00000605318 787 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 RNA5SP439-201ENST00000617595 124 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.63□□□□□ -1.51
HLA-EP13747 AC073342.3-201ENST00000624211 193 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-EP13747 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.63□□□□□ -1.51
HLA-EP13747 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.63□□□□□ -1.51
HLA-EP13747 AC000095.2-202ENST00000637415 154 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 SAMM50P1-201ENST00000455403 1399 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 AC104964.3-201ENST00000606115 2860 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-EP13747 AL034546.1-201ENST00000623740 3693 ntBASIC5.63□□□□□ -1.51
HLA-EP13747 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-EP13747 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-EP13747 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HLA-EP13747 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-EP13747 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HLA-EP13747 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
HLA-EP13747 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 RNA5SP335-201ENST00000363817 110 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 AL009179.1-201ENST00000406085 265 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 RN7SKP17-201ENST00000411242 351 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 AL390774.1-201ENST00000411924 246 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 AL354868.1-201ENST00000417077 482 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-EP13747 RPL12P3-201ENST00000440080 396 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-EP13747 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 AURKAPS1-201ENST00000451805 1212 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 AC005532.2-201ENST00000467154 373 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 AC090602.1-201ENST00000469695 252 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 RPEP1-201ENST00000504507 658 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 ST13P12-201ENST00000508958 1094 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HLA-EP13747 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-EP13747 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.62□□□□□ -1.51
HLA-EP13747 AP001357.1-201ENST00000586304 1053 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 Mico1.1-201ENST00000611698 204 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-EP13747 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
HLA-EP13747 AL121839.2-201ENST00000565058 6943 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-EP13747 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-EP13747 CASC19-260ENST00000641828 2001 ntBASIC5.62□□□□□ -1.51
HLA-EP13747 AL355488.2-201ENST00000609909 2850 ntBASIC5.61□□□□□ -1.51
HLA-EP13747 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HLA-EP13747 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.61□□□□□ -1.51
HLA-EP13747 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-EP13747 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-EP13747 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-EP13747 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-EP13747 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-EP13747 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.61□□□□□ -1.51
HLA-EP13747 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-EP13747 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-EP13747 MT-RNR2-201ENST00000387347 1559 ntBASIC5.61□□□□□ -1.51
HLA-EP13747 AC005042.1-201ENST00000393397 800 ntBASIC5.61□□□□□ -1.51
HLA-EP13747 AL133325.1-201ENST00000421090 382 ntBASIC5.61□□□□□ -1.51
HLA-EP13747 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-EP13747 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-EP13747 AC092106.1-201ENST00000444291 373 ntBASIC5.61□□□□□ -1.51
HLA-EP13747 EEF1B2P5-201ENST00000444820 548 ntBASIC5.61□□□□□ -1.51
HLA-EP13747 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-EP13747 AC091685.2-201ENST00000454924 864 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms