Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ARF4P1-201ENST00000605447 541 ntBASIC2.31□□□□□ -2.04
USH2AO75445 AL021368.3-201ENST00000607119 578 ntBASIC2.31□□□□□ -2.04
USH2AO75445 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC2.31□□□□□ -2.04
USH2AO75445 ATP5A1P1-201ENST00000454088 1321 ntBASIC2.31□□□□□ -2.04
USH2AO75445 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC2.31□□□□□ -2.04
USH2AO75445 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USH2AO75445 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC2.31□□□□□ -2.04
USH2AO75445 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
USH2AO75445 OFD1P8Y-201ENST00000449148 1433 ntBASIC2.31□□□□□ -2.04
USH2AO75445 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USH2AO75445 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
USH2AO75445 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC2.31□□□□□ -2.04
USH2AO75445 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
USH2AO75445 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USH2AO75445 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
USH2AO75445 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USH2AO75445 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC2.31□□□□□ -2.04
USH2AO75445 MIR600-201ENST00000385007 98 ntBASIC2.31□□□□□ -2.04
USH2AO75445 MIR551A-201ENST00000385042 96 ntBASIC2.31□□□□□ -2.04
USH2AO75445 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC2.31□□□□□ -2.04
USH2AO75445 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC2.31□□□□□ -2.04
USH2AO75445 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC2.31□□□□□ -2.04
USH2AO75445 OR52J1P-201ENST00000450596 932 ntBASIC2.31□□□□□ -2.04
USH2AO75445 AC073073.1-201ENST00000493920 463 ntBASIC2.31□□□□□ -2.04
USH2AO75445 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.31□□□□□ -2.04
USH2AO75445 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
USH2AO75445 RPL7P50-201ENST00000600588 727 ntBASIC2.31□□□□□ -2.04
USH2AO75445 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
USH2AO75445 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC2.31□□□□□ -2.04
USH2AO75445 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
USH2AO75445 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC2.31□□□□□ -2.04
USH2AO75445 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USH2AO75445 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USH2AO75445 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
USH2AO75445 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC2.31□□□□□ -2.04
USH2AO75445 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
USH2AO75445 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC2.3□□□□□ -2.04
USH2AO75445 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC2.3□□□□□ -2.04
USH2AO75445 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 RNA5SP326-201ENST00000363209 110 ntBASIC2.3□□□□□ -2.04
USH2AO75445 TPT1P2-201ENST00000413105 503 ntBASIC2.3□□□□□ -2.04
USH2AO75445 PDSS1P1-201ENST00000422953 1114 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AL117339.2-201ENST00000430475 180 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AC079168.2-201ENST00000453977 416 ntBASIC2.3□□□□□ -2.04
USH2AO75445 SCARNA10-201ENST00000459255 330 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC2.3□□□□□ -2.04
USH2AO75445 PTTG3P-201ENST00000521862 606 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC2.3□□□□□ -2.04
USH2AO75445 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 SAMMSON-210ENST00000641260 1308 ntBASIC2.3□□□□□ -2.04
USH2AO75445 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 TCP11X1-202ENST00000622971 1372 ntBASIC2.3□□□□□ -2.04
USH2AO75445 MTCO1P15-201ENST00000529569 1526 ntBASIC2.3□□□□□ -2.04
USH2AO75445 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 AC092747.4-201ENST00000620519 1861 ntBASIC2.3□□□□□ -2.04
USH2AO75445 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 AC011379.1-201ENST00000508713 3025 ntBASIC2.3□□□□□ -2.04
USH2AO75445 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 AC130365.1-201ENST00000530524 1553 ntBASIC2.3□□□□□ -2.04
USH2AO75445 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 AL358176.3-201ENST00000420757 454 ntBASIC2.3□□□□□ -2.04
USH2AO75445 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.3□□□□□ -2.04
USH2AO75445 AL645608.4-201ENST00000423619 154 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC2.3□□□□□ -2.04
USH2AO75445 RPL7L1P3-201ENST00000455249 689 ntBASIC2.3□□□□□ -2.04
USH2AO75445 CYCSP34-201ENST00000458172 304 ntBASIC2.3□□□□□ -2.04
USH2AO75445 RNU2-30P-201ENST00000516209 141 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AL121594.2-201ENST00000541658 472 ntBASIC2.3□□□□□ -2.04
USH2AO75445 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC2.3□□□□□ -2.04
USH2AO75445 OR4H6P-201ENST00000563771 921 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AC023043.4-201ENST00000612081 449 ntBASIC2.3□□□□□ -2.04
USH2AO75445 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AC002044.3-201ENST00000623314 541 ntBASIC2.3□□□□□ -2.04
USH2AO75445 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 ZNF469-202ENST00000565624 13279 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
USH2AO75445 AC005618.1-201ENST00000606901 3148 ntBASIC2.3□□□□□ -2.04
USH2AO75445 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
USH2AO75445 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
USH2AO75445 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC2.3□□□□□ -2.04
USH2AO75445 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms