Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.39□□□□□ -1.07
RNF40O75150 AC139085.1-201ENST00000582716 182 ntBASIC8.39□□□□□ -1.07
RNF40O75150 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC8.39□□□□□ -1.07
RNF40O75150 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.39□□□□□ -1.07
RNF40O75150 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.39□□□□□ -1.07
RNF40O75150 AL390838.2-201ENST00000602394 274 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC245014.2-201ENST00000603689 287 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC246785.4-201ENST00000605374 287 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC090948.2-201ENST00000607363 564 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC8.39□□□□□ -1.07
RNF40O75150 AC005790.1-201ENST00000619774 450 ntBASIC8.39□□□□□ -1.07
RNF40O75150 THAP12P7-201ENST00000520248 2290 ntBASIC8.39□□□□□ -1.07
RNF40O75150 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.39□□□□□ -1.07
RNF40O75150 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.39□□□□□ -1.07
RNF40O75150 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.39□□□□□ -1.07
RNF40O75150 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.39□□□□□ -1.07
RNF40O75150 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RNF40O75150 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RNF40O75150 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RNF40O75150 ATP5BP1-201ENST00000411980 1574 ntBASIC8.39□□□□□ -1.07
RNF40O75150 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC8.39□□□□□ -1.07
RNF40O75150 AL031985.3-201ENST00000565390 2449 ntBASIC8.39□□□□□ -1.07
RNF40O75150 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RNF40O75150 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
RNF40O75150 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.39□□□□□ -1.07
RNF40O75150 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 AC011379.1-201ENST00000508713 3025 ntBASIC8.38□□□□□ -1.07
RNF40O75150 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 HSPD1P1-201ENST00000503199 1726 ntBASIC8.38□□□□□ -1.07
RNF40O75150 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RNF40O75150 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
RNF40O75150 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.38□□□□□ -1.07
RNF40O75150 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.38□□□□□ -1.07
RNF40O75150 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RNF40O75150 HMGB1P5-201ENST00000255320 642 ntBASIC8.38□□□□□ -1.07
RNF40O75150 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RNF40O75150 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RNF40O75150 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 OR9R1P-201ENST00000412200 877 ntBASIC8.38□□□□□ -1.07
RNF40O75150 BX295541.1-201ENST00000417774 250 ntBASIC8.38□□□□□ -1.07
RNF40O75150 AC004690.1-201ENST00000418216 328 ntBASIC8.38□□□□□ -1.07
RNF40O75150 BLOC1S2P1-201ENST00000428431 301 ntBASIC8.38□□□□□ -1.07
RNF40O75150 LSM3P3-201ENST00000436601 306 ntBASIC8.38□□□□□ -1.07
RNF40O75150 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.38□□□□□ -1.07
RNF40O75150 HSPE1P28-201ENST00000443139 211 ntBASIC8.38□□□□□ -1.07
RNF40O75150 MTND6P13-201ENST00000443510 523 ntBASIC8.38□□□□□ -1.07
RNF40O75150 FTH1P7-201ENST00000450676 552 ntBASIC8.38□□□□□ -1.07
RNF40O75150 AL139156.3-201ENST00000454802 394 ntBASIC8.38□□□□□ -1.07
RNF40O75150 RN7SL815P-201ENST00000470970 290 ntBASIC8.38□□□□□ -1.07
RNF40O75150 RPL7P38-201ENST00000488396 739 ntBASIC8.38□□□□□ -1.07
RNF40O75150 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC8.38□□□□□ -1.07
RNF40O75150 SETP14-201ENST00000497538 873 ntBASIC8.38□□□□□ -1.07
RNF40O75150 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC8.38□□□□□ -1.07
RNF40O75150 AC108064.1-201ENST00000513791 460 ntBASIC8.38□□□□□ -1.07
RNF40O75150 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC8.38□□□□□ -1.07
RNF40O75150 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC8.38□□□□□ -1.07
RNF40O75150 COX6CP5-201ENST00000527162 228 ntBASIC8.38□□□□□ -1.07
RNF40O75150 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.38□□□□□ -1.07
RNF40O75150 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.38□□□□□ -1.07
RNF40O75150 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC8.38□□□□□ -1.07
RNF40O75150 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC8.38□□□□□ -1.07
RNF40O75150 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.38□□□□□ -1.07
RNF40O75150 RPL35AP25-201ENST00000584631 330 ntBASIC8.38□□□□□ -1.07
RNF40O75150 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.38□□□□□ -1.07
RNF40O75150 AC009027.1-201ENST00000604510 479 ntBASIC8.38□□□□□ -1.07
RNF40O75150 AL365434.2-201ENST00000607979 234 ntBASIC8.38□□□□□ -1.07
RNF40O75150 AL590560.2-201ENST00000608430 732 ntBASIC8.38□□□□□ -1.07
RNF40O75150 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.38□□□□□ -1.07
RNF40O75150 AC143336.1-201ENST00000614164 836 ntBASIC8.38□□□□□ -1.07
RNF40O75150 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 AC087588.2-201ENST00000617667 426 ntBASIC8.38□□□□□ -1.07
RNF40O75150 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.38□□□□□ -1.07
RNF40O75150 AC093591.3-201ENST00000634516 308 ntBASIC8.38□□□□□ -1.07
RNF40O75150 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.38□□□□□ -1.07
RNF40O75150 SEC63P2-201ENST00000503863 1939 ntBASIC8.38□□□□□ -1.07
RNF40O75150 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
RNF40O75150 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 AL118496.1-201ENST00000440201 1812 ntBASIC8.38□□□□□ -1.07
RNF40O75150 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.38□□□□□ -1.07
RNF40O75150 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
RNF40O75150 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 FARSBP1-201ENST00000435808 1778 ntBASIC8.38□□□□□ -1.07
RNF40O75150 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
RNF40O75150 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RNF40O75150 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.37□□□□□ -1.07
RNF40O75150 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC8.37□□□□□ -1.07
RNF40O75150 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
RNF40O75150 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.37□□□□□ -1.07
RNF40O75150 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
RNF40O75150 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms