Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC188H7C350 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC188H7C350 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CCDC188H7C350 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC188H7C350 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC188H7C350 SNORA11.5-201ENST00000408163 128 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC188H7C350 RPSAP32-201ENST00000432681 526 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC188H7C350 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC188H7C350 RPSAP37-201ENST00000470913 821 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 RPS3AP15-201ENST00000483874 781 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 RN7SL193P-201ENST00000491708 276 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 EIF3KP3-201ENST00000514461 639 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 HMGN1P9-201ENST00000515212 298 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 SNORA70.17-201ENST00000516449 133 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 SCARNA20.4-201ENST00000516969 131 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 RN7SKP35-201ENST00000517210 151 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AC027369.5-201ENST00000533838 755 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC188H7C350 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC188H7C350 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC188H7C350 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AP000550.3-201ENST00000637734 379 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
CCDC188H7C350 AC104623.2-202ENST00000623477 4002 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 ADAM5-202ENST00000399789 1942 ntBASIC5.75□□□□□ -1.49
CCDC188H7C350 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC188H7C350 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC188H7C350 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC188H7C350 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC188H7C350 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC188H7C350 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC188H7C350 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC188H7C350 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
CCDC188H7C350 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC188H7C350 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 AC022417.1-201ENST00000624768 1303 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC188H7C350 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCDC188H7C350 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCDC188H7C350 AC112255.1-201ENST00000624070 2493 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC188H7C350 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC188H7C350 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC188H7C350 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC188H7C350 RNU6-819P-201ENST00000364116 107 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC188H7C350 RBBP4P5-201ENST00000398583 1266 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 AC099535.1-201ENST00000408928 371 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 AC234781.4-201ENST00000419384 244 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 PRUNEP1-201ENST00000425846 705 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC188H7C350 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC188H7C350 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC188H7C350 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC188H7C350 YRDCP3-201ENST00000456507 480 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 RPL31P53-201ENST00000457065 348 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 SNRPCP11-201ENST00000492453 205 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 RPS24P16-201ENST00000497294 392 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 NACAP5-201ENST00000509863 636 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 RN7SKP238-201ENST00000516483 249 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC188H7C350 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC188H7C350 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC188H7C350 AC007956.1-201ENST00000555623 542 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC188H7C350 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC188H7C350 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC188H7C350 MIR4433B-201ENST00000581329 102 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC188H7C350 PRPF19P1-201ENST00000584766 898 ntBASIC5.74□□□□□ -1.49
CCDC188H7C350 FAM60CP-201ENST00000591086 664 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms