Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AC083899.1-201ENST00000454465 3819 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 AL132656.3-201ENST00000606384 1595 ntBASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TCRBV7S3A2A0A539 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 OR4F13P-202ENST00000560066 2054 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 SNORA70.6-201ENST00000383934 134 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 RNU6-925P-201ENST00000384629 104 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC007068.1-201ENST00000396690 844 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 RPS6P23-201ENST00000413224 722 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 MARK2P12-201ENST00000420129 585 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AL354766.1-201ENST00000423396 542 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 ELOCP3-201ENST00000439303 348 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AL513321.1-201ENST00000441175 761 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 LINC02210-201ENST00000444561 288 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 FCF1P6-201ENST00000456841 595 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 RN7SL570P-201ENST00000484405 292 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 DUTP7-201ENST00000507982 486 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 FABP5P6-201ENST00000510588 409 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC074255.1-201ENST00000511259 501 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC114781.3-201ENST00000512083 142 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC010374.2-201ENST00000512933 535 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 SCARNA6.1-201ENST00000516989 238 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 SCARNA1-201ENST00000517138 166 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 RN7SKP183-201ENST00000517169 324 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC103833.1-201ENST00000517442 172 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC122688.1-201ENST00000541494 223 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC068305.2-201ENST00000550567 1205 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 BNIP3P40-201ENST00000596017 556 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AC009237.13-201ENST00000603193 276 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 AL138955.1-201ENST00000622881 1040 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 CASC19-274ENST00000642018 970 ntBASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
TCRBV7S3A2A0A539 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 GAPDHP24-201ENST00000328713 983 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 RPSAP35-201ENST00000413753 818 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 MORF4L1P7-201ENST00000426038 703 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 UBE2D3P3-201ENST00000426992 425 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 RPS26P4-201ENST00000431743 355 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 TMEM183AP1-205ENST00000432739 290 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 NDUFB4P8-201ENST00000435351 367 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 AC093166.3-201ENST00000448785 303 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 RPS17P15-201ENST00000475609 349 ntBASIC5.74□□□□□ -1.49
TCRBV7S3A2A0A539 RPL12P7-201ENST00000493832 494 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms