Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 PENK-204ENST00000518770 863 ntTSL 2 BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
TNFRSF11AQ9Y6Q6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 LINC01465-201ENST00000408887 1940 ntBASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TNFRSF11AQ9Y6Q6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 FAM197Y1-201ENST00000421178 764 ntBASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TNFRSF11AQ9Y6Q6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
TNFRSF11AQ9Y6Q6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TNFRSF11AQ9Y6Q6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
TNFRSF11AQ9Y6Q6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TNFRSF11AQ9Y6Q6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TNFRSF11AQ9Y6Q6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TNFRSF11AQ9Y6Q6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TNFRSF11AQ9Y6Q6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC24.08■■□□□ 1.45
TNFRSF11AQ9Y6Q6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.08■■□□□ 1.45
TNFRSF11AQ9Y6Q6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC24.08■■□□□ 1.45
TNFRSF11AQ9Y6Q6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
TNFRSF11AQ9Y6Q6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TNFRSF11AQ9Y6Q6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TNFRSF11AQ9Y6Q6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.08■■□□□ 1.44
TNFRSF11AQ9Y6Q6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
TNFRSF11AQ9Y6Q6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.44
TNFRSF11AQ9Y6Q6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 AC004264.1-201ENST00000608354 794 ntBASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.07■■□□□ 1.44
TNFRSF11AQ9Y6Q6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 AL353708.3-201ENST00000610272 989 ntBASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 HLA-A-209ENST00000638375 975 ntBASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNFRSF11AQ9Y6Q6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.05■■□□□ 1.44
TNFRSF11AQ9Y6Q6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNFRSF11AQ9Y6Q6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNFRSF11AQ9Y6Q6 MIR718-201ENST00000390190 70 ntBASIC24.05■■□□□ 1.44
TNFRSF11AQ9Y6Q6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms