Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 AC104581.1-202ENST00000635932 2618 ntBASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 AC007322.3-201ENST00000426526 701 ntBASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 AC243732.1-201ENST00000612648 864 ntBASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGB1Q9Y5G3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 KRT18P5-201ENST00000436075 1291 ntBASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 KRT18P20-201ENST00000548986 1279 ntBASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGB1Q9Y5G3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 CCDC92B-201ENST00000575506 885 ntBASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 PCDHB18P-201ENST00000524813 2368 ntBASIC17.93■□□□□ 0.46
PCDHGB1Q9Y5G3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 HCG11-201ENST00000411553 5696 ntBASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 PGM5P4-201ENST00000421970 445 ntBASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.92■□□□□ 0.46
PCDHGB1Q9Y5G3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms