Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHB1Q9Y5F3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.64■□□□□ 0.74
PCDHB1Q9Y5F3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHB1Q9Y5F3 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHB1Q9Y5F3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 KRT17P2-201ENST00000300992 1314 ntBASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 AC239809.2-201ENST00000415381 517 ntBASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 TSPY15P-201ENST00000457163 923 ntBASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 AL049637.2-201ENST00000641778 930 ntBASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHB1Q9Y5F3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHB1Q9Y5F3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 AC006557.6-201ENST00000623071 864 ntBASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 AC133561.5-201ENST00000635547 218 ntBASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHB1Q9Y5F3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 AC133681.1-201ENST00000465482 601 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms