Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 AC023632.3-201ENST00000521633 145 ntBASIC19.18■□□□□ 0.66
SATB2Q9UPW6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 AC073195.1-201ENST00000607241 877 ntBASIC19.18■□□□□ 0.66
SATB2Q9UPW6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SATB2Q9UPW6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 AC007952.6-201ENST00000573168 2673 ntBASIC19.17■□□□□ 0.66
SATB2Q9UPW6 AC003957.1-201ENST00000625108 2673 ntBASIC19.17■□□□□ 0.66
SATB2Q9UPW6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 AL049597.2-201ENST00000565575 961 ntBASIC19.17■□□□□ 0.66
SATB2Q9UPW6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SATB2Q9UPW6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 RBM17P1-201ENST00000453646 1190 ntBASIC19.16■□□□□ 0.66
SATB2Q9UPW6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 AC145285.6-201ENST00000604632 637 ntBASIC19.16■□□□□ 0.66
SATB2Q9UPW6 AL121906.2-201ENST00000621597 723 ntBASIC19.16■□□□□ 0.66
SATB2Q9UPW6 AC092865.7-201ENST00000641832 219 ntBASIC19.16■□□□□ 0.66
SATB2Q9UPW6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.16■□□□□ 0.66
SATB2Q9UPW6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 NUDT16P1-203ENST00000513809 620 ntBASIC19.15■□□□□ 0.66
SATB2Q9UPW6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 AC004264.1-201ENST00000608354 794 ntBASIC19.15■□□□□ 0.66
SATB2Q9UPW6 AC005363.2-201ENST00000618631 242 ntBASIC19.15■□□□□ 0.66
SATB2Q9UPW6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SATB2Q9UPW6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.14■□□□□ 0.66
SATB2Q9UPW6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms