Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 NBPF21P-201ENST00000425093 1451 ntBASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA1Q9UND3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 HLA-G-202ENST00000376815 851 ntBASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 HLA-G-203ENST00000376818 1127 ntBASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 LINC01023-201ENST00000606054 436 ntBASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 AL121906.2-201ENST00000621597 723 ntBASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.11■□□□□ 0.49
NPIPA1Q9UND3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 AL162377.1-201ENST00000618844 1793 ntBASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 DPP3P2-201ENST00000416030 1696 ntBASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 HTR7P1-201ENST00000538670 1336 ntBASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 SMG8-203ENST00000578922 2178 ntBASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA1Q9UND3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 KRT16P5-201ENST00000455284 522 ntBASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 TSPY15P-201ENST00000457163 923 ntBASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NPIPA1Q9UND3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms