Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD9Q9P000 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD9Q9P000 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
COMMD9Q9P000 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.69■□□□□ 0.26
COMMD9Q9P000 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 AL136967.2-201ENST00000623968 743 ntBASIC16.69■□□□□ 0.26
COMMD9Q9P000 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COMMD9Q9P000 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD9Q9P000 LTB4R2-202ENST00000528054 3092 ntBASIC16.68■□□□□ 0.26
COMMD9Q9P000 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 AC005332.8-201ENST00000622750 2735 ntBASIC16.68■□□□□ 0.26
COMMD9Q9P000 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 AC079140.4-201ENST00000507448 529 ntBASIC16.68■□□□□ 0.26
COMMD9Q9P000 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 AL031432.3-201ENST00000607698 485 ntBASIC16.68■□□□□ 0.26
COMMD9Q9P000 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD9Q9P000 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD9Q9P000 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 AC245052.3-201ENST00000450182 901 ntBASIC16.67■□□□□ 0.26
COMMD9Q9P000 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 AC120498.10-201ENST00000621827 505 ntBASIC16.67■□□□□ 0.26
COMMD9Q9P000 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 KRT16P2-201ENST00000414673 1423 ntBASIC16.67■□□□□ 0.26
COMMD9Q9P000 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD9Q9P000 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 AL049812.1-201ENST00000432563 2267 ntBASIC16.67■□□□□ 0.26
COMMD9Q9P000 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD9Q9P000 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms