Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 RN7SL471P-201ENST00000580476 299 ntBASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 MTDHP1-201ENST00000605323 784 ntBASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 AC018553.1-201ENST00000616682 1458 ntBASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 AC124283.5-201ENST00000624661 1809 ntBASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PARPBPQ9NWS1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PARPBPQ9NWS1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 AC007952.6-201ENST00000573168 2673 ntBASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 AC003957.1-201ENST00000625108 2673 ntBASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PARPBPQ9NWS1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
PARPBPQ9NWS1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
PARPBPQ9NWS1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PARPBPQ9NWS1 TFP1-202ENST00000475455 1573 ntBASIC17.52■□□□□ 0.39
PARPBPQ9NWS1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PARPBPQ9NWS1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms