Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 AC068338.2-201ENST00000563278 1430 ntBASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
ABCF3Q9NUQ8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 CDCA4P2-201ENST00000441182 718 ntBASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 AC005181.1-201ENST00000604782 1256 ntBASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ABCF3Q9NUQ8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 MIR663A-201ENST00000385250 93 ntBASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 CYP2T1P-201ENST00000432607 1285 ntBASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ABCF3Q9NUQ8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 AC026185.1-201ENST00000445748 174 ntBASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 AC008694.1-202ENST00000636953 945 ntBASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ABCF3Q9NUQ8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ABCF3Q9NUQ8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.86■□□□□ 0.77
ABCF3Q9NUQ8 AC120498.9-201ENST00000339021 3867 ntBASIC19.86■□□□□ 0.77
ABCF3Q9NUQ8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCF3Q9NUQ8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCF3Q9NUQ8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms