Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
POLE3Q9NRF9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 AC060766.5-201ENST00000590539 871 ntBASIC18.22■□□□□ 0.51
POLE3Q9NRF9 AL109923.1-201ENST00000618799 583 ntBASIC18.22■□□□□ 0.51
POLE3Q9NRF9 AC133041.1-202ENST00000642053 222 ntBASIC18.22■□□□□ 0.51
POLE3Q9NRF9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLE3Q9NRF9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 AC142086.2-201ENST00000569753 217 ntBASIC18.21■□□□□ 0.51
POLE3Q9NRF9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.21■□□□□ 0.51
POLE3Q9NRF9 TFP1-202ENST00000475455 1573 ntBASIC18.21■□□□□ 0.51
POLE3Q9NRF9 AC092368.3-202ENST00000574180 1591 ntBASIC18.21■□□□□ 0.51
POLE3Q9NRF9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
POLE3Q9NRF9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 AL158211.5-201ENST00000623583 2518 ntBASIC18.2■□□□□ 0.5
POLE3Q9NRF9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLE3Q9NRF9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 AC069152.1-201ENST00000438030 544 ntBASIC18.19■□□□□ 0.5
POLE3Q9NRF9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.19■□□□□ 0.5
POLE3Q9NRF9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.19■□□□□ 0.5
POLE3Q9NRF9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms